Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.5222
AA410130
expressed sequence AA410130
17
106491
Mm.5222
Srrm2
serine/arginine repetitive matrix 2
17
75956
Human Homolog
SRRM2[serine/arginine repetitive matrix 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAGGAGTCT
(
2
)
8.2
0.0082
P8 Cb GC
CTGAAGGTGG
(
3
)
3.3
0.0033
P8 Cb GC
CAGACTCAAG
(
4
)
1.6
0.0016
P8 Cb GC
CAGGCTGATG
(
3
)
1.6
0.0016
P8 Cb GC
GCCACCGCCC
(
2
)
1.6
0.0016
Cb medulloblastoma
CAGACTCAAG
(
4
)
2.3
0.0023
Cb medulloblastoma
GCCACCGCCC
(
2
)
2.3
0.0023
P8 GC+1d culture
GAAGGAGTCT
(
2
)
5.7
0.0057
P8 GC+1d culture
AAAGAACAGT
(
3
)
1.1
0.0011
P8 GC+1d culture
ACTCAATTCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAGGAGTCT
(
2
)
8.2
0.0082
3T3 fibroblasts
CTGAAGGTGG
(
3
)
7
0.007
3T3 fibroblasts
TTGCTGGAAA
(
2
)
3.5
0.0035
E15 cortex
CAGACTCAAG
(
4
)
4.9
0.0049
P1 cortex
GAAGGAGTCT
(
2
)
9.1
0.0091
P1 cortex
TTGCTGGAAA
(
2
)
9.1
0.0091
Hypothalamus
GAAGGAGTCT
(
2
)
7.2
0.0072
E12.5 retina
GAAGGAGTCT
(
2
)
15
0.015
E12.5 retina
ACTCAATTCA
(
3
)
1.9
0.0019
E12.5 retina
CTGAAGGTGG
(
3
)
1.9
0.0019
E16.5 retina
GAAGGAGTCT
(
2
)
1.8
0.0018
E16.5 retina
TTGCTGGAAA
(
2
)
1.8
0.0018
E18.5 retina
GAAGGAGTCT
(
2
)
7.3
0.0073
E18.5 retina
AAAGAACAGT
(
3
)
1.8
0.0018
P0.5 retina
CTGAAGGTGG
(
3
)
5.9
0.0059
P0.5 retina
GAAGGAGTCT
(
2
)
3.9
0.0039
P2.5 retina
GAAGGAGTCT
(
2
)
24.6
0.0246
P2.5 retina
TTGCTGGAAA
(
2
)
1.8
0.0018
P4.5 retina
GAAGGAGTCT
(
2
)
21.8
0.0218
P4.5 retina
AAGGCAAAAC
(
4
)
2
0.002
P4.5 retina
CTGAAGGTGG
(
3
)
2
0.002
P4.5 retina
TTGCTGGAAA
(
2
)
2
0.002
P6.5 retina
GAAGGAGTCT
(
2
)
20
0.02
P6.5 retina
TTGCTGGAAA
(
2
)
3.3
0.0033
P6.5 retina
CAGGCTGATG
(
3
)
1.7
0.0017
P10.5 crx- retina
GAAGGAGTCT
(
2
)
7.4
0.0074
P10.5 crx- retina
CTGAAGGTGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GAAGGAGTCT
(
2
)
15.4
0.0154
P10.5 crx+ retina
CTGAAGGTGG
(
3
)
1.9
0.0019
Adult retinal
GAAGGAGTCT
(
2
)
7.4
0.0074
Adult retinal
AAAGAACAGT
(
3
)
1.9
0.0019
Adult retinal
AAGGCAAAAC
(
4
)
1.9
0.0019
Adult retinal
CAGGCTGATG
(
3
)
1.9
0.0019
Adult retinal
CTGAAGGTGG
(
3
)
1.9
0.0019
ONL
GAAGGAGTCT
(
2
)
9.6
0.0096
ONL
AAGGCAAAAC
(
4
)
1.9
0.0019
