Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.52583
D13Wsu50e
DNA segment, Chr 13, Wayne State University 50, expressed
13
13 41.0 cM
28077
Mm.52583
1700025O18Rik
RIKEN cDNA 1700025O18 gene
13
69410
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGTTTCAACT
(
7
)
11.4
0.0114
Cb medulloblastoma
GGTTTCAACT
(
7
)
6.9
0.0069
Cb medulloblastoma
GCACAGCTGG (
4
)
2.3
0.0023
P8 GC+1d culture
GGTTTCAACT
(
7
)
20.5
0.0205
P8 GC+1d culture
CAGGAAGACA (
4
)
2.3
0.0023
P8 GC+1d culture
GGTTTTAACT
(
6
)
2.3
0.0023
P8 GC+1d culture
GCACAGCTGG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGTTTCAACT
(
7
)
24.6
0.0246
P8 GC+SHH+1d culture
CAGGAAGACA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GGTTTTAACT
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGGTTCACTA
(
9
)
1.2
0.0012
3T3 fibroblasts
CAGGAAGACA (
4
)
3.5
0.0035
E15 cortex
CAGGAAGACA (
4
)
4.9
0.0049
E15 cortex
GGTTTCAACT
(
7
)
4.9
0.0049
P1 cortex
GGTTTCAACT
(
7
)
13.6
0.0136
Hypothalamus
GGTTTCAACT
(
7
)
5.4
0.0054
Hypothalamus
GGTTTTAACT
(
6
)
3.6
0.0036
Hypothalamus
CAGGAAGACA (
4
)
1.8
0.0018
Hypothalamus
GGGTTCACTA
(
9
)
1.8
0.0018
E12.5 retina
GGTTTCAACT
(
7
)
11.3
0.0113
E12.5 retina
CAGGAAGACA (
4
)
7.5
0.0075
E12.5 retina
GGTTTTAACT
(
6
)
1.9
0.0019
E14.5 retina
GGTTTCAACT
(
7
)
23.7
0.0237
E14.5 retina
GGTTTTAACT
(
6
)
10.9
0.0109
E14.5 retina
GCACAGCTGG (
4
)
1.8
0.0018
E16.5 retina
GGTTTCAACT
(
7
)
14.5
0.0145
E16.5 retina
GGTTTTAACT
(
6
)
5.4
0.0054
E16.5 retina
GGGTTCACTA
(
9
)
3.6
0.0036
E16.5 retina
CAGGAAGACA (
4
)
1.8
0.0018
E18.5 retina
GGTTTCAACT
(
7
)
16.4
0.0164
E18.5 retina
AAAACAGTTA (
6
)
1.8
0.0018
E18.5 retina
GCACAGCTGG (
4
)
1.8
0.0018
E18.5 retina
GGGTTCACTA
(
9
)
1.8
0.0018
P0.5 retina
GGTTTCAACT
(
7
)
7.9
0.0079
P0.5 retina
AAAACAGTTA (
6
)
2
0.002
P0.5 retina
CAGGAAGACA (
4
)
2
0.002
P2.5 retina
GGTTTCAACT
(
7
)
24.6
0.0246
P2.5 retina
CAGGAAGACA (
4
)
3.5
0.0035
P2.5 retina
GGTTTTAACT
(
6
)
1.8
0.0018
P4.5 retina
GGTTTCAACT
(
7
)
15.9
0.0159
P4.5 retina
GGTTTTAACT
(
6
)
4
0.004
P4.5 retina
CAGGAAGACA (
4
)
2
0.002
P6.5 retina
GGGTTCACTA
(
9
)
10
0.01
P6.5 retina
GGTTTCAACT
(
7
)
8.3
0.0083
P6.5 retina
CAGGAAGACA (
4
)
3.3
0.0033
P6.5 retina
GGTTTTAACT
(
6
)
3.3
0.0033
P10.5 crx- retina
GGTTTCAACT
(
7
)
13
0.013
P10.5 crx- retina
GGGTTCACTA
(
9
)
3.7
0.0037
P10.5 crx+ retina
GGGTTCACTA
(
9
)
9.6
0.0096
P10.5 crx+ retina
GGTTTCAACT
(
7
)
3.8
0.0038
P10.5 crx+ retina
GCACAGCTGG (
4
)
1.9
0.0019
P10.5 crx+ retina
GGTTTTAACT
(
6
)
1.9
0.0019
Adult retinal
GGTTTCAACT
(
7
)
5.6
0.0056
Adult retinal
CAGGAAGACA (
4
)
3.7
0.0037
Adult retinal
GGGTTCACTA
(
9
)
1.9
0.0019
ONL
GGTTTCAACT
(
7
)
5.7
0.0057
ONL
AAAACAGTTA (
6
)
3.8
0.0038
ONL
GGTTTTAACT
(
6
)
1.9
0.0019
