Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5286	Arbp	acidic ribosomal phosphoprotein P0	5		11837
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP0[ribosomal protein, large, P0]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 234 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAACATCT (6) 53.8 0.0538 P8 Cb GC ATGCGCAAGG (3) 9.8 0.0098 P8 Cb GC GTTCCAGCCG (2) 8.2 0.0082 P8 Cb GC ATGGCAAGCT (3) 3.3 0.0033 P8 Cb GC CGGATCTGCT (3) 3.3 0.0033 P8 Cb GC GAGAAAAAAA (18) 3.3 0.0033 P8 Cb GC GAGCACATCC (5) 3.3 0.0033 P8 Cb GC GTCTGTGGAG (5) 3.3 0.0033 P8 Cb GC TGAACATCTC (3) 3.3 0.0033 P8 Cb GC CCTGAACATC (4) 1.6 0.0016 P8 Cb GC CTGAACACCT (3) 1.6 0.0016 P8 Cb GC CTGAACATTT (2) 1.6 0.0016 P8 Cb GC CTGAACTTCT (3) 1.6 0.0016 P8 Cb GC CTGAGCACTC (2) 1.6 0.0016 P8 Cb GC GGCCACCTGG (7) 1.6 0.0016 P8 Cb GC GTGGCCCTTG (3) 1.6 0.0016 P8 Cb GC TCGCTCCGAG (2) 1.6 0.0016 P8 Cb GC TCTGTGGAGA (5) 1.6 0.0016 P8 Cb GC TGTCTGTGGA (5) 1.6 0.0016 P8 Cb GC TTCAGCAGTG 1.6 0.0016 Cb medulloblastoma GAGAAAAAAA (18) 11.6 0.0116 Cb medulloblastoma GTGGCCCTTG (3) 9.2 0.0092 Cb medulloblastoma CTGAACATCT (6) 6.9 0.0069 Cb medulloblastoma TCTGTGGAGA (5) 4.6 0.0046 Cb medulloblastoma ATGGCAAGCT (3) 2.3 0.0023 Cb medulloblastoma CTGAACGTCT (2) 2.3 0.0023 Cb medulloblastoma GTCTGTGGAG (5) 2.3 0.0023 Cb medulloblastoma GTTCCAGCCG (2) 2.3 0.0023 P8 GC+1d culture CTGAACATCT (6) 76.5 0.0765 P8 GC+1d culture GAGAAAAAAA (18) 4.6 0.0046 P8 GC+1d culture GTCTGTGGAG (5) 4.6 0.0046 P8 GC+1d culture GTTCCAGCCG (2) 3.4 0.0034 P8 GC+1d culture TTCAGCAGTG 3.4 0.0034 P8 GC+1d culture TGAACATCTC (3) 2.3 0.0023 P8 GC+1d culture AGGCTGCTGG (5) 1.1 0.0011 P8 GC+1d culture ATGGCAAGCT (3) 1.1 0.0011 P8 GC+1d culture CTAAACATCT (2) 1.1 0.0011 P8 GC+1d culture CTGAACACCT (3) 1.1 0.0011 P8 GC+1d culture CTGAACATCC (4) 1.1 0.0011 P8 GC+1d culture CTGAACGTCT (2) 1.1 0.0011 P8 GC+1d culture GAGCACATCC (5) 1.1 0.0011 P8 GC+1d culture GCTGGTGGAG (6) 1.1 0.0011 P8 GC+1d culture GGCTTCCTGG (7) 1.1 0.0011 P8 GC+1d culture GGGAAGGAGG (6) 1.1 0.0011 P8 GC+SHH+1d culture CTGAACATCT (6) 66.7 0.0667 P8 GC+SHH+1d culture GTTCCAGCCG (2) 11.7 0.0117 P8 GC+SHH+1d culture ATGGCAAGCT (3) 5.9 0.0059 P8 GC+SHH+1d culture GAGCACATCC (5) 5.9 0.0059 P8 GC+SHH+1d culture TTCAGCAGTG 5.9 0.0059 P8 GC+SHH+1d culture GAGAAAAAAA (18) 3.5 0.0035 P8 GC+SHH+1d culture CCTGAACATC (4) 2.3 0.0023 P8 GC+SHH+1d culture CTGAACATCC (4) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTCCTGG (7) 2.3 0.0023 P8 GC+SHH+1d culture GTCTGTGGAG (5) 2.3 0.0023 P8 GC+SHH+1d culture TGAACATCTC (3) 2.3 0.0023 P8 GC+SHH+1d culture ATGCGCAAGG (3) 1.2 0.0012 P8 GC+SHH+1d culture CGGATCTGCT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGAGCACTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAGGGAA (14) 1.2 0.0012 P8 GC+SHH+1d culture GGGTACCAGG (3) 1.2 0.0012 3T3 fibroblasts CTGAACATCT (6) 147.2 0.1472 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AGGCTGCTGG (5) 7 0.007 3T3 fibroblasts GTCTGTGGAG (5) 7 0.007 3T3 fibroblasts ATGGCAAGCT (3) 3.5 0.0035 3T3 fibroblasts CTGAACACCT (3) 3.5 0.0035 3T3 fibroblasts GAGCACATCC (5) 3.5 0.0035 3T3 fibroblasts GGCTCCAAGC (2) 3.5 0.0035 3T3 fibroblasts GTTCCAGCCG (2) 3.5 0.0035 3T3 fibroblasts TCTGTGGAGA (5) 3.5 0.0035 3T3 fibroblasts TTCAGCAGTG 3.5 0.0035 E15 cortex CTGAACATCT (6) 54.4 0.0544 E15 cortex AGGCTGCTGG (5) 4.9 0.0049 E15 cortex ATGCGCAAGG (3) 4.9 0.0049 E15 cortex CTGAACATCC (4) 4.9 0.0049 E15 cortex GGCTTCCTGG (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTTCCAGCCG (2) 4.9 0.0049 E15 cortex TGAACATCTC (3) 4.9 0.0049 P1 cortex CTGAACATCT (6) 72.7 0.0727 P1 cortex GTCTGTGGAG (5) 9.1 0.0091 P1 cortex GTTCCAGCCG (2) 9.1 0.0091 P1 cortex AAGAAGACAG (11) 4.5 0.0045 P1 cortex CTAAACATCT (2) 4.5 0.0045 P1 cortex GAGAAAAAAA (18) 4.5 0.0045 P1 cortex GAGCACATCC (5) 4.5 0.0045 P1 cortex TGTCTGTGGA (5) 4.5 0.0045 Hypothalamus GGGTACCAGG (3) 12.7 0.0127 Hypothalamus CTGAACATCT (6) 9.1 0.0091 Hypothalamus GAGCACATCC (5) 3.6 0.0036 Hypothalamus AAGAAGACAG (11) 1.8 0.0018 Hypothalamus CGGATCTGCT (3) 1.8 0.0018 Hypothalamus CTGAACGTCT (2) 1.8 0.0018 Hypothalamus CTGAACTTCT (3) 1.8 0.0018 Hypothalamus CTGCTGGCCA (10) 1.8 0.0018 Hypothalamus GAGAAAAAAA (18) 1.8 0.0018 Hypothalamus GTTCCAGCCG (2) 1.8 0.0018 E12.5 retina CTGAACATCT (6) 46.9 0.0469 E12.5 retina GTTCCAGCCG (2) 11.3 0.0113 E12.5 retina TTCAGCAGTG 9.4 0.0094 E12.5 retina GTCTGTGGAG (5) 3.8 0.0038 E12.5 retina TGAACATCTC (3) 3.8 0.0038 E12.5 retina ATGCGCAAGG (3) 1.9 0.0019 E12.5 retina CTGAACATCC (4) 1.9 0.0019 E12.5 retina CTGAACTTCT (3) 1.9 0.0019 E12.5 retina CTGAATATCT 1.9 0.0019 E12.5 retina CTGATCATCT (2) 1.9 0.0019 E12.5 retina GAGCACATCC (5) 1.9 0.0019 E12.5 retina GGGAAGGGAA (14) 1.9 0.0019 E12.5 retina GGGTACCAGG (3) 1.9 0.0019 E14.5 retina CTGAACATCT (6) 36.4 0.0364 E14.5 retina GAGAAAAAAA (18) 9.1 0.0091 E14.5 retina TTCAGCAGTG 9.1 0.0091 E14.5 retina CTGAACATCC (4) 5.5 0.0055 E14.5 retina ATGGCAAGCT (3) 3.6 0.0036 E14.5 retina GAGCACATCC (5) 3.6 0.0036 E14.5 retina GGCTTCCTGG (7) 3.6 0.0036 E14.5 retina TGAACATCTC (3) 3.6 0.0036 E14.5 retina ATGCGCAAGG (3) 1.8 0.0018 E14.5 retina CGGATCTGCT (3) 1.8 0.0018 E14.5 retina CTGAACGTCT (2) 1.8 0.0018 E14.5 retina CTGAATATCT 1.8 0.0018 E14.5 retina GGCTCCAAGC (2) 1.8 0.0018 E14.5 retina GGGAAGGAGG (6) 1.8 0.0018 E14.5 retina TCGCTCCGAG (2) 1.8 0.0018 E16.5 retina CTGAACATCT (6) 25.4 0.0254 E16.5 retina AAGAAGACAG (11) 3.6 0.0036 E16.5 retina GAGCACATCC (5) 3.6 0.0036 E16.5 retina GGCTTCCTGG (7) 3.6 0.0036 E16.5 retina AGGCTGCTGG (5) 1.8 0.0018 E16.5 retina ATGCGCAAGG (3) 1.8 0.0018 E16.5 retina CTGAACATCC (4) 1.8 0.0018 E16.5 retina CTGAACATTT (2) 1.8 0.0018 E16.5 retina CTGAGCACTC (2) 1.8 0.0018 E16.5 retina CTGATCATCT (2) 1.8 0.0018 E16.5 retina GAGAAAAAAA (18) 1.8 0.0018 E16.5 retina GTCTGTGGAG (5) 1.8 0.0018 E16.5 retina TTCAGCAGTG 1.8 0.0018 E18.5 retina CTGAACATCT (6) 29.1 0.0291 E18.5 retina TGAACATCTC (3) 7.3 0.0073 E18.5 retina GAGCACATCC (5) 3.6 0.0036 E18.5 retina GGCTTCCTGG (7) 3.6 0.0036 E18.5 retina CTGAACGTCT (2) 1.8 0.0018 E18.5 retina GAGAAAAAAA (18) 1.8 0.0018 E18.5 retina GCTGGTGGAG (6) 1.8 0.0018 E18.5 retina GGGTACCAGG (3) 1.8 0.0018 E18.5 retina GTTCCAGCCG (2) 1.8 0.0018 E18.5 retina TGTTTGACAA (4) 1.8 0.0018 E18.5 retina TTCAGCAGTG 1.8 0.0018 P0.5 retina CTGAACATCT (6) 94.2 0.0942 P0.5 retina ATGGCAAGCT (3) 5.9 0.0059 P0.5 retina GTCTGTGGAG (5) 5.9 0.0059 P0.5 retina CGGATCTGCT (3) 3.9 0.0039 P0.5 retina CTGAACACCT (3) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GTTCCAGCCG (2) 3.9 0.0039 P0.5 retina CTGAACATTT (2) 2 0.002 P0.5 retina CTGAATATCT 2 0.002 P0.5 retina CTGAGCACTC (2) 2 0.002 P0.5 retina GAGAAAAAAA (18) 2 0.002 P0.5 retina GAGCACATCC (5) 2 0.002 P0.5 retina GGCTTCCTGG (7) 2 0.002 P0.5 retina TGAACATCTC (3) 2 0.002 P0.5 retina TGTCTGTGGA (5) 2 0.002 P2.5 retina CTGAACATCT (6) 28.2 0.0282 P2.5 retina GGGTACCAGG (3) 5.3 0.0053 P2.5 retina CTGAGCACTC (2) 3.5 0.0035 P2.5 retina GAGAAAAAAA (18) 3.5 0.0035 P2.5 retina GAGCACATCC (5) 3.5 0.0035 P2.5 retina TGAACATCTC (3) 3.5 0.0035 P2.5 retina CCTGAACATC (4) 1.8 0.0018 P2.5 retina CGGATCTGCT (3) 1.8 0.0018 P2.5 retina GGGAAGGAGG (6) 1.8 0.0018 P2.5 retina GGGAAGGGAA (14) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTCTGTGGAG (5) 1.8 0.0018 P4.5 retina CTGAACATCT (6) 25.8 0.0258 P4.5 retina GAGAAAAAAA (18) 5.9 0.0059 P4.5 retina GGGTACCAGG (3) 5.9 0.0059 P4.5 retina ATGGCAAGCT (3) 2 0.002 P4.5 retina CGGATCTGCT (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGAACATCTC (3) 2 0.002 P4.5 retina TGTTTGACAA (4) 2 0.002 P4.5 retina TTCAGCAGTG 2 0.002 P6.5 retina CTGAACATCT (6) 30 0.03 P6.5 retina GTTCCAGCCG (2) 6.7 0.0067 P6.5 retina GAGAAAAAAA (18) 3.3 0.0033 P6.5 retina GGGAAGGGAA (14) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AGGCTGCTGG (5) 1.7 0.0017 P6.5 retina ATGGCAAGCT (3) 1.7 0.0017 P6.5 retina GGCTTCCTGG (7) 1.7 0.0017 P6.5 retina GGGTACCAGG (3) 1.7 0.0017 P6.5 retina GTCTGTGGAG (5) 1.7 0.0017 P6.5 retina TGAACATCTC (3) 1.7 0.0017 P6.5 retina TTCAGCAGTG 1.7 0.0017 P10.5 crx- retina CTGAACATCT (6) 11.1 0.0111 P10.5 crx- retina GAGCACATCC (5) 5.6 0.0056 P10.5 crx- retina GTCTGTGGAG (5) 5.6 0.0056 P10.5 crx- retina CTGAACATCC (4) 3.7 0.0037 P10.5 crx- retina ATGGCAAGCT (3) 1.9 0.0019 P10.5 crx- retina GAGAAAAAAA (18) 1.9 0.0019 P10.5 crx- retina GGCTTCCTGG (7) 1.9 0.0019 P10.5 crx- retina TCGCTCCGAG (2) 1.9 0.0019 P10.5 crx- retina TCTGTGGAGA (5) 1.9 0.0019 P10.5 crx- retina TGAACATCTC (3) 1.9 0.0019 P10.5 crx+ retina CTGAACATCT (6) 7.7 0.0077 P10.5 crx+ retina GAGAAAAAAA (18) 7.7 0.0077 P10.5 crx+ retina GTCTGTGGAG (5) 3.8 0.0038 P10.5 crx+ retina GTTCCAGCCG (2) 3.8 0.0038 P10.5 crx+ retina ATGCGCAAGG (3) 1.9 0.0019 P10.5 crx+ retina CTGAACATCC (4) 1.9 0.0019 P10.5 crx+ retina CTGCTGGCCA (10) 1.9 0.0019 P10.5 crx+ retina GCTGGTGGAG (6) 1.9 0.0019 P10.5 crx+ retina GGGAAGGAGG (6) 1.9 0.0019 Adult retinal CTGAACATCT (6) 14.8 0.0148 Adult retinal CTGCTGGCCA (10) 3.7 0.0037 Adult retinal CCTGAACATC (4) 1.9 0.0019 Adult retinal CTAAACATCT (2) 1.9 0.0019 Adult retinal CTGAACATCC (4) 1.9 0.0019 Adult retinal CTGAACGTCT (2) 1.9 0.0019 Adult retinal GGCTTCCTGG (7) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTCTGTGGAG (5) 1.9 0.0019 Adult retinal TGTCTGTGGA (5) 1.9 0.0019 Adult retinal TGTTTGACAA (4) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CTGAATATCT 3.8 0.0038 ONL GGCCACCTGG (7) 3.8 0.0038 ONL GGGAAGGGAA (14) 3.8 0.0038 ONL CTGAACATCT (6) 1.9 0.0019 ONL GAGAAAAAAA (18) 1.9 0.0019 ONL GGCTCCAAGC (2) 1.9 0.0019