| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CATTAAACCT (4) GAAATAAAAA
| 4.9 | 0.0049 |
| Cb medulloblastoma | GAAATAAAAA TGTATAACAC TTATCATCAA
| 9.2 | 0.0092 |
| P8 GC+SHH+1d culture | GAAATAAAAA TTATCATCAT
| 4.6 | 0.0046 |
| Hypothalamus | CATTAAACCT (4) TGTATAACAC TTATCATCAA
| 7.2 | 0.0072 |
| E12.5 retina | GTCACTGGGA (2)
| 1.9 | 0.0019 |
| E14.5 retina | GAAATAAAAA GGAAAATGAG GTCACTGGGA (2) TTATCATCAT
| 9 | 0.009 |
| E16.5 retina | GGAAAATGAG GTCACTGGGA (2) TGTATAACAC
| 14.4 | 0.0144 |
| E18.5 retina | GAAATAAAAA GTCACTGGGA (2) TTATCATCAA TTATCATCAT
| 12.7 | 0.0127 |
| P2.5 retina | CATTAAACCT (4) TTATCATCAA TTATCATCAT
| 7.1 | 0.0071 |
| P4.5 retina | GAAATAAAAA GTCACTGGGA (2) TTATCATCAT
| 10 | 0.01 |
| P6.5 retina | GTCACTGGGA (2) TGTATAACAC TTATCATCAA
| 6.7 | 0.0067 |
| P10.5 crx- retina | GAAATAAAAA TGTATAACAC
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GGAAAATGAG GTCACTGGGA (2) TTATCATCAT
| 5.7 | 0.0057 |
| Adult retinal | TGTATAACAC
| 1.9 | 0.0019 |
| ONL | GAAATAAAAA
| 1.9 | 0.0019 |