Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5346	Mep1a	meprin 1 alpha	17	17 30.4 cM	17287
Gene Ontology	astacin activity | extracellular space | hydrolase activity | integral to membrane | membrane | meprin A activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MEP1A[meprin A, alpha (PABA peptide hydrolase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTGAGAT (3) 53.8 0.0538 P8 Cb GC CAGTTTTTTT 3.3 0.0033 P8 Cb GC ATCTAATAAA (3) 1.6 0.0016 P8 Cb GC ATGCAGACCT 1.6 0.0016 P8 Cb GC GACAAGTACT (3) 1.6 0.0016 Cb medulloblastoma GACACTCAAT (8) 92.5 0.0925 Cb medulloblastoma CCTTTGAGAT (3) 6.9 0.0069 Cb medulloblastoma AGCAGCAAGG (2) 2.3 0.0023 Cb medulloblastoma CAGTTTTTTT 2.3 0.0023 Cb medulloblastoma TGGACAACTC (4) 2.3 0.0023 P8 GC+1d culture CCTTTGAGAT (3) 49.1 0.0491 P8 GC+1d culture GACACTCAAT (8) 9.1 0.0091 P8 GC+1d culture AGCAGCAAGG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTGAGAT (3) 50.3 0.0503 P8 GC+SHH+1d culture GACACTCAAT (8) 11.7 0.0117 3T3 fibroblasts CCTTTGAGAT (3) 77.1 0.0771 E15 cortex CCTTTGAGAT (3) 34.6 0.0346 E15 cortex GACACTCAAT (8) 9.9 0.0099 P1 cortex CCTTTGAGAT (3) 45.5 0.0455 P1 cortex GACACTCAAT (8) 22.7 0.0227 P1 cortex GGGGACAGAG (5) 4.5 0.0045 Hypothalamus GACACTCAAT (8) 88.7 0.0887 Hypothalamus GACAAGTACT (3) 3.6 0.0036 Hypothalamus ATCTAATAAA (3) 1.8 0.0018 Hypothalamus CCTTTGAGAT (3) 1.8 0.0018 E12.5 retina CCTTTGAGAT (3) 69.5 0.0695 E12.5 retina GACACTCAAT (8) 3.8 0.0038 E14.5 retina GACACTCAAT (8) 14.6 0.0146 E14.5 retina CCTTTGAGAT (3) 7.3 0.0073 E14.5 retina ATCTAATAAA (3) 1.8 0.0018 E14.5 retina CAGTTTTTTT 1.8 0.0018 E16.5 retina CCTTTGAGAT (3) 19.9 0.0199 E16.5 retina GACACTCAAT (8) 10.9 0.0109 E16.5 retina ATGCAGACCT 1.8 0.0018 E16.5 retina TGGACAACTC (4) 1.8 0.0018 E18.5 retina GACACTCAAT (8) 27.3 0.0273 E18.5 retina CCTTTGAGAT (3) 7.3 0.0073 E18.5 retina TTGAGAGGGG (2) 3.6 0.0036 E18.5 retina ATCTAATAAA (3) 1.8 0.0018 E18.5 retina TGGACAACTC (4) 1.8 0.0018 P0.5 retina CCTTTGAGAT (3) 70.7 0.0707 P0.5 retina GACACTCAAT (8) 5.9 0.0059 P0.5 retina AGCAGCAAGG (2) 2 0.002 P2.5 retina GACACTCAAT (8) 40.5 0.0405 P2.5 retina CCTTTGAGAT (3) 7 0.007 P4.5 retina GACACTCAAT (8) 61.4 0.0614 P4.5 retina CCTTTGAGAT (3) 21.8 0.0218 P4.5 retina TTGAGAGGGG (2) 2 0.002 P6.5 retina GACACTCAAT (8) 66.7 0.0667 P6.5 retina CCTTTGAGAT (3) 5 0.005 P6.5 retina AGCAGCAAGG (2) 1.7 0.0017 P6.5 retina ATCTAATAAA (3) 1.7 0.0017 P10.5 crx- retina CCTTTGAGAT (3) 50.2 0.0502 P10.5 crx- retina GACACTCAAT (8) 31.6 0.0316 P10.5 crx- retina GGGGACAGAG (5) 1.9 0.0019 P10.5 crx+ retina GACACTCAAT (8) 115.3 0.1153 P10.5 crx+ retina CCTTTGAGAT (3) 11.5 0.0115 P10.5 crx+ retina GGGGACAGAG (5) 1.9 0.0019 Adult retinal GACACTCAAT (8) 51.8 0.0518 Adult retinal CCTTTGAGAT (3) 14.8 0.0148 Adult retinal GGGGACAGAG (5) 3.7 0.0037 Adult retinal CAGTTTTTTT 1.9 0.0019 ONL GACACTCAAT (8) 82.4 0.0824 ONL CCTTTGAGAT (3) 13.4 0.0134 ONL GGGGACAGAG (5) 3.8 0.0038