Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.5399
AI506816
expressed sequence AI506816
5
100694
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCCACAC
(
8
)
138.7
0.1387
P8 Cb GC
GAAGGTCCAG
(
4
)
1.6
0.0016
Cb medulloblastoma
CAGGCCACAC
(
8
)
270.6
0.2706
Cb medulloblastoma
ACAATAAACG
(
3
)
6.9
0.0069
P8 GC+1d culture
CAGGCCACAC
(
8
)
97
0.097
P8 GC+1d culture
GAAGGTCCAG
(
4
)
26.3
0.0263
P8 GC+1d culture
ACAATAAACG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGGCCACAC
(
8
)
125.3
0.1253
P8 GC+SHH+1d culture
GAAGGTCCAG
(
4
)
12.9
0.0129
P8 GC+SHH+1d culture
AATTCAAGGC
(
6
)
1.2
0.0012
3T3 fibroblasts
CAGGCCACAC
(
8
)
140.2
0.1402
E15 cortex
CAGGCCACAC
(
8
)
84.1
0.0841
P1 cortex
CAGGCCACAC
(
8
)
27.3
0.0273
Hypothalamus
CAGGCCACAC
(
8
)
148.5
0.1485
Hypothalamus
ACAATAAACG
(
3
)
1.8
0.0018
E12.5 retina
CAGGCCACAC
(
8
)
103.3
0.1033
E14.5 retina
CAGGCCACAC
(
8
)
138.5
0.1385
E16.5 retina
CAGGCCACAC
(
8
)
126.8
0.1268
E18.5 retina
CAGGCCACAC
(
8
)
112.8
0.1128
E18.5 retina
ACAATAAACG
(
3
)
3.6
0.0036
E18.5 retina
AATTCAAGGC
(
6
)
1.8
0.0018
E18.5 retina
GAAGGTCCAG
(
4
)
1.8
0.0018
P0.5 retina
CAGGCCACAC
(
8
)
90.3
0.0903
P0.5 retina
AATTCAAGGC
(
6
)
2
0.002
P0.5 retina
GAAGGTCCAG
(
4
)
2
0.002
P2.5 retina
CAGGCCACAC
(
8
)
88
0.088
P2.5 retina
AATTCAAGGC
(
6
)
1.8
0.0018
P4.5 retina
CAGGCCACAC
(
8
)
93.1
0.0931
P4.5 retina
ACAATAAACG
(
3
)
4
0.004
P6.5 retina
CAGGCCACAC
(
8
)
161.7
0.1617
P6.5 retina
AATTCAAGGC
(
6
)
1.7
0.0017
P6.5 retina
ACAATAAACG
(
3
)
1.7
0.0017
P10.5 crx- retina
CAGGCCACAC
(
8
)
189.5
0.1895
P10.5 crx+ retina
CAGGCCACAC
(
8
)
207.6
0.2076
Adult retinal
CAGGCCACAC
(
8
)
137
0.137
Adult retinal
ACAATAAACG
(
3
)
1.9
0.0019
ONL
CAGGCCACAC
(
8
)
88.1
0.0881
ONL
AATTCAAGGC
(
6
)
3.8
0.0038
ONL
GAAGGTCCAG
(
4
)
3.8
0.0038
