Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.548	Srcs3	v-src suppressed transcript 3			20783
Mm.548	Cox6c	cytochrome c oxidase, subunit VIc	15		12864
Gene Ontology	cytochrome-c oxidase activity | electron transport | extracellular space | inner membrane | integral to membrane | mitochondrion | mitochondrion | oxidoreductase activity | respiratory chain complex IV (sensu Eukarya)
Human Homolog	COX6C[cytochrome c oxidase subunit VIc]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATATGTGTG (2) 66.9 0.0669 P8 Cb GC GAATCATAAT (3) 1.6 0.0016 Cb medulloblastoma AATATGTGTG (2) 48.6 0.0486 Cb medulloblastoma GGGGGGGGTT (9) 4.6 0.0046 Cb medulloblastoma GTAGCCAATG (2) 2.3 0.0023 Cb medulloblastoma TTTCATAGTT (2) 2.3 0.0023 P8 GC+1d culture AATATGTGTG (2) 82.2 0.0822 P8 GC+1d culture GTAGCCAATG (2) 1.1 0.0011 P8 GC+1d culture TTTCATAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture AATATGTGTG (2) 58.5 0.0585 P8 GC+SHH+1d culture GTAGCCAATG (2) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 3T3 fibroblasts AATATGTGTG (2) 24.5 0.0245 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex AATATGTGTG (2) 24.7 0.0247 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AATATGTGTG (2) 95.5 0.0955 Hypothalamus AATATGTGTG (2) 117.7 0.1177 Hypothalamus GTAGCCAATG (2) 18.1 0.0181 Hypothalamus GAATCATAAT (3) 7.2 0.0072 Hypothalamus TTTCATAGTT (2) 5.4 0.0054 Hypothalamus AAAGATTTCG (2) 3.6 0.0036 Hypothalamus AGTTCCGGTG (3) 3.6 0.0036 Hypothalamus AAAAAATTCA (9) 1.8 0.0018 Hypothalamus GGGGGGGGTT (9) 1.8 0.0018 E12.5 retina AATATGTGTG (2) 77 0.077 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina GTAGCCAATG (2) 1.9 0.0019 E14.5 retina AATATGTGTG (2) 92.9 0.0929 E14.5 retina AAAAAATTCA (9) 1.8 0.0018 E14.5 retina AAAGATTTCG (2) 1.8 0.0018 E14.5 retina AGTTCCGGTG (3) 1.8 0.0018 E14.5 retina TTTCATAGTT (2) 1.8 0.0018 E16.5 retina AATATGTGTG (2) 85.1 0.0851 E16.5 retina AGTTCCGGTG (3) 7.2 0.0072 E16.5 retina GTAGCCAATG (2) 3.6 0.0036 E16.5 retina TGGTAATGGG (3) 3.6 0.0036 E16.5 retina AAAGATTTCG (2) 1.8 0.0018 E16.5 retina TTTCATAGTT (2) 1.8 0.0018 E18.5 retina AATATGTGTG (2) 60 0.06 E18.5 retina AAAAAATTCA (9) 1.8 0.0018 E18.5 retina TTTCATAGTT (2) 1.8 0.0018 P0.5 retina AATATGTGTG (2) 51 0.051 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina AATATGTGTG (2) 93.3 0.0933 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTTCATAGTT (2) 1.8 0.0018 P4.5 retina AATATGTGTG (2) 83.2 0.0832 P4.5 retina AAAGATTTCG (2) 2 0.002 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GTAGCCAATG (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTTCATAGTT (2) 2 0.002 P6.5 retina AATATGTGTG (2) 123.4 0.1234 P6.5 retina GTAGCCAATG (2) 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GAATCATAAT (3) 1.7 0.0017 P10.5 crx- retina AATATGTGTG (2) 150.5 0.1505 P10.5 crx- retina AGTTCCGGTG (3) 3.7 0.0037 P10.5 crx- retina GAATCATAAT (3) 1.9 0.0019 P10.5 crx- retina GTAGCCAATG (2) 1.9 0.0019 P10.5 crx+ retina AATATGTGTG (2) 103.8 0.1038 P10.5 crx+ retina GTAGCCAATG (2) 1.9 0.0019 P10.5 crx+ retina TTTCATAGTT (2) 1.9 0.0019 Adult retinal AATATGTGTG (2) 59.2 0.0592 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AATATGTGTG (2) 109.2 0.1092 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGGGGGGGTT (9) 1.9 0.0019 ONL GTAGCCAATG (2) 1.9 0.0019 ONL TGGTAATGGG (3) 1.9 0.0019