Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.5510
Trim47
tripartite motif protein 47
11
217333
Gene Ontology
intracellular
|
zinc ion binding
Human Homolog
TRIM47[tripartite motif-containing 47]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
ATTCCGAATT (
107
)
1.6
0.0016
Cb medulloblastoma
GCCTGGGCTC (
6
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
CCCTGGCCTT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
GCCTGGGCTC (
6
)
1.2
0.0012
3T3 fibroblasts
CCCTGGCCTT
(
6
)
7
0.007
3T3 fibroblasts
GCCTGGGCTC (
6
)
3.5
0.0035
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
CTGCGGGGGG
7.2
0.0072
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
GCCTGGGCTC (
6
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
CTGCGGGGGG
1.8
0.0018
E14.5 retina
GCCTGGGCTC (
6
)
1.8
0.0018
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
GCCTGGGCTC (
6
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
CTGCGGGGGG
3.6
0.0036
E18.5 retina
GCCTGGGCTC (
6
)
1.8
0.0018
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GCCTGGGCTC (
6
)
3.5
0.0035
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
ATTCCGAATT (
107
)
2
0.002
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
ATTCCGAATT (
107
)
3.3
0.0033
P6.5 retina
GCCTGGGCTC (
6
)
1.7
0.0017
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
GCCTGGGCTC (
6
)
1.9
0.0019
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GCCTGGGCTC (
6
)
1.9
0.0019
ONL
ATTCCGAATT (
107
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
