Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.57223	E130115I21Rik	RIKEN cDNA E130115I21 gene	19		77871
Mm.57223	Hells	helicase, lymphoid specific	19	19 C3-D1	15201
Gene Ontology	anti-apoptosis | ATP binding | ATP dependent helicase activity | DNA binding | DNA methylation | helicase activity | hydrolase activity | lymphocyte differentiation | nucleic acid binding | nucleus | urogenital system development
Human Homolog	HELLS[helicase, lymphoid-specific]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TGTGGTGGAG (7) 3.3 0.0033 P8 Cb GC GGATTTGGAC (6) 1.6 0.0016 P8 Cb GC TGAGGATACA (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TCCATCCAGG (4) 11.6 0.0116 Cb medulloblastoma GGATTTGGAC (6) 2.3 0.0023 Cb medulloblastoma TGTGGTGGAG (7) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TGTGGTGGAG (7) 4.6 0.0046 P8 GC+1d culture CCCTTAATCC (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TGTGGTGGAG (7) 3.5 0.0035 P8 GC+SHH+1d culture GGATTTGGAC (6) 2.3 0.0023 P8 GC+SHH+1d culture TCCATCCAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGAGGATACA (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TGTGGTGGAG (7) 10.5 0.0105 3T3 fibroblasts CTGGAGGAGG (9) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TGTGGTGGAG (7) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TCCATCCAGG (4) 9.1 0.0091 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TGTGGTGGAG (7) 7.2 0.0072 Hypothalamus TCCATCCAGG (4) 3.6 0.0036 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GGATTTGGAC (6) 13.1 0.0131 E12.5 retina TGTGGTGGAG (7) 5.6 0.0056 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TGTGGTGGAG (7) 3.6 0.0036 E14.5 retina ACACAGGAAG (4) 1.8 0.0018 E14.5 retina CCCTTAATCC (7) 1.8 0.0018 E14.5 retina CTGGAGGAGG (9) 1.8 0.0018 E14.5 retina GGATTTGGAC (6) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina ACACAGGAAG (4) 1.8 0.0018 E16.5 retina CTGGAGGAGG (9) 1.8 0.0018 E16.5 retina GGATTTGGAC (6) 1.8 0.0018 E16.5 retina TCCATCCAGG (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TGTGGTGGAG (7) 10.9 0.0109 E18.5 retina GGATTTGGAC (6) 9.1 0.0091 E18.5 retina CTTGTCATTT (2) 5.5 0.0055 E18.5 retina ACACAGGAAG (4) 1.8 0.0018 E18.5 retina TCCATCCAGG (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TGTGGTGGAG (7) 5.9 0.0059 P0.5 retina CCCTTAATCC (7) 3.9 0.0039 P0.5 retina GGATTTGGAC (6) 3.9 0.0039 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TGTGGTGGAG (7) 15.8 0.0158 P2.5 retina CTTGTCATTT (2) 3.5 0.0035 P2.5 retina GGATTTGGAC (6) 3.5 0.0035 P2.5 retina CCCTTAATCC (7) 1.8 0.0018 P2.5 retina CTGGAGGAGG (9) 1.8 0.0018 P2.5 retina TCCATCCAGG (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TGTGGTGGAG (7) 11.9 0.0119 P4.5 retina CCCTTAATCC (7) 2 0.002 P4.5 retina CTTGTCATTT (2) 2 0.002 P4.5 retina TGAGGATACA (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TGTGGTGGAG (7) 8.3 0.0083 P6.5 retina TCCATCCAGG (4) 5 0.005 P6.5 retina TGAGGATACA (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TCCATCCAGG (4) 20.4 0.0204 P10.5 crx- retina TGTGGTGGAG (7) 11.1 0.0111 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TGTGGTGGAG (7) 13.5 0.0135 P10.5 crx+ retina TCCATCCAGG (4) 11.5 0.0115 P10.5 crx+ retina GGATTTGGAC (6) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TCCATCCAGG (4) 33.3 0.0333 Adult retinal TGTGGTGGAG (7) 3.7 0.0037 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CCCTTAATCC (7) 7.7 0.0077 ONL TGTGGTGGAG (7) 5.7 0.0057 ONL TGAGGATACA (3) 3.8 0.0038 ONL GGATTTGGAC (6) 1.9 0.0019