| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACTTTAACAG (2) ATGCAGACTT (2)
| 22.8 | 0.0228 |
| Cb medulloblastoma | ATGCAGACTT (2)
| 34.7 | 0.0347 |
| P8 GC+1d culture | AGCACGGATG (3) ATGCAGACTT (2)
| 22.8 | 0.0228 |
| P8 GC+SHH+1d culture | ACTTTAACAG (2) AGCACGGATG (3) ATGCAGACTT (2)
| 28.2 | 0.0282 |
| 3T3 fibroblasts | AGCACGGATG (3) ATGCAGACTT (2)
| 14 | 0.014 |
| E15 cortex | ATGCAGACTT (2)
| 34.6 | 0.0346 |
| P1 cortex | ATGCAGACTT (2)
| 13.6 | 0.0136 |
| Hypothalamus | ACTTTAACAG (2) ATGCAGACTT (2)
| 23.5 | 0.0235 |
| E12.5 retina | ACTTTAACAG (2) AGCACGGATG (3) ATGCAGACTT (2)
| 26.3 | 0.0263 |
| E14.5 retina | ACTTTAACAG (2) ATGCAGACTT (2)
| 29.1 | 0.0291 |
| E16.5 retina | ACTTTAACAG (2) AGCACGGATG (3) ATGCAGACTT (2)
| 32.6 | 0.0326 |
| E18.5 retina | AGCACGGATG (3) ATGCAGACTT (2)
| 34.5 | 0.0345 |
| P0.5 retina | AGCACGGATG (3) ATGCAGACTT (2)
| 21.6 | 0.0216 |
| P2.5 retina | AGCACGGATG (3) ATGCAGACTT (2)
| 36.9 | 0.0369 |
| P4.5 retina | ATGCAGACTT (2)
| 25.8 | 0.0258 |
| P6.5 retina | ACTTTAACAG (2) AGCACGGATG (3) ATGCAGACTT (2)
| 30 | 0.03 |
| P10.5 crx- retina | AGCACGGATG (3) ATGCAGACTT (2)
| 31.6 | 0.0316 |
| P10.5 crx+ retina | AGCACGGATG (3) ATGCAGACTT (2)
| 38.4 | 0.0384 |
| Adult retinal | AGCACGGATG (3) ATGCAGACTT (2)
| 29.7 | 0.0297 |
| ONL | ACTTTAACAG (2) ATGCAGACTT (2)
| 5.7 | 0.0057 |