Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.589	Gpi1	glucose phosphate isomerase 1	7	7 11.0 cM	14751
Gene Ontology	cytokine activity | gluconeogenesis | glucose-6-phosphate isomerase activity | glycolysis | growth factor activity | isomerase activity
Human Homolog	GPI[glucose phosphate isomerase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 170 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TTGTTCTGAC (2) 19.6 0.0196 P8 Cb GC GGGGCTCAGC (3) 16.3 0.0163 P8 Cb GC TAGTGCATAT (2) 3.3 0.0033 P8 Cb GC TTGTTTTGCC 3.3 0.0033 P8 Cb GC GAAGTTTTGA (4) 1.6 0.0016 P8 Cb GC GTGACTGGAA (3) 1.6 0.0016 P8 Cb GC TATCTTCCAC (5) 1.6 0.0016 P8 Cb GC TCCTCCCCCA (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GGGGCTCAGC (3) 27.7 0.0277 Cb medulloblastoma TTGTTCTGAC (2) 23.1 0.0231 Cb medulloblastoma CTGGTGTTTG (6) 2.3 0.0023 Cb medulloblastoma TACTCACATA 2.3 0.0023 Cb medulloblastoma TAGTGCATAT (2) 2.3 0.0023 Cb medulloblastoma TATCTTCCAC (5) 2.3 0.0023 Cb medulloblastoma TCCTCCCCCA (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CCCCCAAAAA (6) 46.8 0.0468 P8 GC+1d culture GGGGCTCAGC (3) 25.1 0.0251 P8 GC+1d culture TTGTTCTGAC (2) 24 0.024 P8 GC+1d culture GGAGCCAATG (2) 3.4 0.0034 P8 GC+1d culture TATCTTCCAC (5) 3.4 0.0034 P8 GC+1d culture TCCTCCCCCA (3) 2.3 0.0023 P8 GC+1d culture GGGGCCCCTT (6) 1.1 0.0011 P8 GC+1d culture TAAGGTTTGA 1.1 0.0011 P8 GC+1d culture TAGTGCATAT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CCCCCAAAAA (6) 31.6 0.0316 P8 GC+SHH+1d culture TTGTTCTGAC (2) 28.1 0.0281 P8 GC+SHH+1d culture GGGGCTCAGC (3) 10.5 0.0105 P8 GC+SHH+1d culture TAGTGCATAT (2) 2.3 0.0023 P8 GC+SHH+1d culture TATCTTCCAC (5) 2.3 0.0023 P8 GC+SHH+1d culture TTAATTAGGC 2.3 0.0023 P8 GC+SHH+1d culture CTGGTGTTTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGAGCCAATG (2) 1.2 0.0012 P8 GC+SHH+1d culture TACTCACATA 1.2 0.0012 P8 GC+SHH+1d culture TCCTCCCCCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGCGCTCAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGGACATCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGTTGGTGG (11) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GGGGCTCAGC (3) 14 0.014 3T3 fibroblasts TGGCGCTCAC (2) 7 0.007 3T3 fibroblasts TGGTTGGTGG (11) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GGGGCTCAGC (3) 9.9 0.0099 E15 cortex GTGACTGGAA (3) 9.9 0.0099 E15 cortex TGGTTGGTGG (11) 4.9 0.0049 E15 cortex TTGTTCTGAC (2) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TAGTGCATAT (2) 4.5 0.0045 P1 cortex TATCTTCCAC (5) 4.5 0.0045 P1 cortex TCCTCCCCCA (3) 4.5 0.0045 P1 cortex TGGTTGGTGG (11) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GGGGCTCAGC (3) 32.6 0.0326 Hypothalamus TTGTTCTGAC (2) 30.8 0.0308 Hypothalamus TAGTGCATAT (2) 9.1 0.0091 Hypothalamus GGAGGTCACA (2) 3.6 0.0036 Hypothalamus CAGAGACAGC (4) 1.8 0.0018 Hypothalamus CCCCCAAAAA (6) 1.8 0.0018 Hypothalamus GGGCTCAGCC (3) 1.8 0.0018 Hypothalamus TACTCACATA 1.8 0.0018 Hypothalamus TTAATTAGGC 1.8 0.0018 Hypothalamus TTGTTTTGCC 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GGGGCTCAGC (3) 26.3 0.0263 E12.5 retina TTGTTCTGAC (2) 24.4 0.0244 E12.5 retina TAGTGCATAT (2) 5.6 0.0056 E12.5 retina GGGGCCCCTT (6) 1.9 0.0019 E12.5 retina TTAATTAGGC 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TTGTTCTGAC (2) 16.4 0.0164 E14.5 retina GGGGCTCAGC (3) 5.5 0.0055 E14.5 retina TGGTTGGTGG (11) 3.6 0.0036 E14.5 retina CAGAGACAGC (4) 1.8 0.0018 E14.5 retina GAAGTTTTGA (4) 1.8 0.0018 E14.5 retina GGAGCCAATG (2) 1.8 0.0018 E14.5 retina TAGTGCATAT (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TTGTTCTGAC (2) 27.2 0.0272 E16.5 retina GGGGCTCAGC (3) 5.4 0.0054 E16.5 retina CAGAGACAGC (4) 3.6 0.0036 E16.5 retina GAAGTTTTGA (4) 3.6 0.0036 E16.5 retina TATCTTCCAC (5) 3.6 0.0036 E16.5 retina ACACGTCAAA 1.8 0.0018 E16.5 retina TGGTTGGTGG (11) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GGGGCTCAGC (3) 38.2 0.0382 E18.5 retina TTGTTCTGAC (2) 32.7 0.0327 E18.5 retina GAAGTTTTGA (4) 5.5 0.0055 E18.5 retina GGAGCCAATG (2) 3.6 0.0036 E18.5 retina TCCTCCCCCA (3) 3.6 0.0036 E18.5 retina GGGGGCTCTG (7) 1.8 0.0018 E18.5 retina TACTCACATA 1.8 0.0018 E18.5 retina TAGTGCATAT (2) 1.8 0.0018 E18.5 retina TATCTTCCAC (5) 1.8 0.0018 E18.5 retina TTAATTAGGC 1.8 0.0018 E18.5 retina TTGTTTTGAC 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GGGGCTCAGC (3) 23.6 0.0236 P0.5 retina TTGTTCTGAC (2) 7.9 0.0079 P0.5 retina GTGACTGGAA (3) 2 0.002 P0.5 retina TACTCACATA 2 0.002 P0.5 retina TAGTGCATAT (2) 2 0.002 P0.5 retina TATCTTCCAC (5) 2 0.002 P0.5 retina TGGTTGGTGG (11) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GGGGCTCAGC (3) 49.3 0.0493 P2.5 retina TTGTTCTGAC (2) 38.7 0.0387 P2.5 retina TAGTGCATAT (2) 7 0.007 P2.5 retina ACACGTCAAA 1.8 0.0018 P2.5 retina GGGGGCTCTG (7) 1.8 0.0018 P2.5 retina TATCTTCCAC (5) 1.8 0.0018 P2.5 retina TCCTCCCCCA (3) 1.8 0.0018 P2.5 retina TTAATTAGGC 1.8 0.0018 P2.5 retina TTGTTTTGCC 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TTGTTCTGAC (2) 45.6 0.0456 P4.5 retina GGGGCTCAGC (3) 37.6 0.0376 P4.5 retina TAGTGCATAT (2) 5.9 0.0059 P4.5 retina TGGTTGGTGG (11) 5.9 0.0059 P4.5 retina TTGTTTTGCC 4 0.004 P4.5 retina GGGCTCAGCC (3) 2 0.002 P4.5 retina GGGGGCTCTG (7) 2 0.002 P4.5 retina TATCTTCCAC (5) 2 0.002 P4.5 retina TCCTCCCCCA (3) 2 0.002 P4.5 retina TGGGACATCC (2) 2 0.002 P4.5 retina TTAATTAGGC 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GGGGCTCAGC (3) 43.4 0.0434 P6.5 retina TTGTTCTGAC (2) 33.3 0.0333 P6.5 retina TAGTGCATAT (2) 5 0.005 P6.5 retina TGGTTGGTGG (11) 5 0.005 P6.5 retina TTGTTTTGCC 3.3 0.0033 P6.5 retina ACACGTCAAA 1.7 0.0017 P6.5 retina CAGAGACAGC (4) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TTGTTCTGAC (2) 29.7 0.0297 P10.5 crx- retina GGGGCTCAGC (3) 20.4 0.0204 P10.5 crx- retina TAGTGCATAT (2) 3.7 0.0037 P10.5 crx- retina GGGGGCTCTG (7) 1.9 0.0019 P10.5 crx- retina TATCTTCCAC (5) 1.9 0.0019 P10.5 crx- retina TTAATTAGGC 1.9 0.0019 P10.5 crx- retina TTGTTTTGAC 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GGGGCTCAGC (3) 73.1 0.0731 P10.5 crx+ retina TTGTTCTGAC (2) 46.1 0.0461 P10.5 crx+ retina TAAGGTTTGA 3.8 0.0038 P10.5 crx+ retina CCCCCAAAAA (6) 1.9 0.0019 P10.5 crx+ retina GGAGGTCACA (2) 1.9 0.0019 P10.5 crx+ retina GTGACTGGAA (3) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GGGGCTCAGC (3) 51.8 0.0518 Adult retinal TTGTTCTGAC (2) 37 0.037 Adult retinal TAGTGCATAT (2) 5.6 0.0056 Adult retinal CTGGTGTTTG (6) 1.9 0.0019 Adult retinal GGGCTCAGCC (3) 1.9 0.0019 Adult retinal GGGGCCCCTT (6) 1.9 0.0019 Adult retinal TGGTTGGTGG (11) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GGGGCTCAGC (3) 13.4 0.0134 ONL TTGTTCTGAC (2) 13.4 0.0134 ONL ACAGTCAGGG (4) 5.7 0.0057 ONL TGGTTGGTGG (11) 3.8 0.0038 ONL CAGAGACAGC (4) 1.9 0.0019 ONL GAAGTTTTGA (4) 1.9 0.0019 ONL GGAGGTCACA (2) 1.9 0.0019 ONL TCCTCCCCCA (3) 1.9 0.0019