Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.60061
D1Ertd228e
DNA segment, Chr 1, ERATO Doi 228, expressed
1
1 13.0 cM
52189
Mm.60061
C030033M19Rik
RIKEN cDNA C030033M19 gene
1
226928
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
Cb medulloblastoma
CATTTTGTAT
(
4
)
4.6
0.0046
Cb medulloblastoma
TCTATACTTC
(
3
)
4.6
0.0046
Cb medulloblastoma
CTGGATTTGA (
3
)
2.3
0.0023
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
CTGGATTTGA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
TCTATACTTC
(
3
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
E15 cortex
CTGGATTTGA (
3
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E14.5 retina
CATTTTGTAT
(
4
)
1.8
0.0018
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
CATTTTGTAT
(
4
)
1.8
0.0018
E18.5 retina
TCTATACTTC
(
3
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P2.5 retina
CATTTTGTAT
(
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TCTATACTTC
(
3
)
1.8
0.0018
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P4.5 retina
CATTTTGTAT
(
4
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TCTATACTTC
(
3
)
2
0.002
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P6.5 retina
CATTTTGTAT
(
4
)
10
0.01
P6.5 retina
CTGGATTTGA (
3
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TCTATACTTC
(
3
)
3.3
0.0033
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx- retina
TCTATACTTC
(
3
)
3.7
0.0037
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
Adult retinal
CATTTTGTAT
(
4
)
1.9
0.0019
Adult retinal
CTGGATTTGA (
3
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
CTGGATTTGA (
3
)
1.9
0.0019
