Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6118	Snx17	sorting nexin 17	5	5 18.0 cM	266781
Gene Ontology	cytoplasm | early endosome | protein binding | receptor mediated endocytosis
Human Homolog	SNX17[sorting nexin 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTGTTTCT 11.4 0.0114 Cb medulloblastoma GGTTGTTTCT 4.6 0.0046 P8 GC+1d culture GAGTGTTAGA GGTTGTTTCT GTCAGGGGGC (2) 6.8 0.0068 P8 GC+SHH+1d culture GAGTGTTAGA GGTTGTTTCT GTCAGGGGGC (2) 10.6 0.0106 3T3 fibroblasts GGTTGTTTCT 3.5 0.0035 E15 cortex GGTTGTTTCT GTCAGGGGGC (2) 24.7 0.0247 P1 cortex GGTTGTTTCT 4.5 0.0045 Hypothalamus GGTTGTTTCT 1.8 0.0018 E12.5 retina GACTCCCGGC GGTTGTTTCT GTCAGGGGGC (2) 7.6 0.0076 E14.5 retina GACTCCCGGC GGTTGTTTCT GTCAGGGGGC (2) 9 0.009 E16.5 retina GGTTGTTTCT GTCAGGGGGC (2) 9 0.009 E18.5 retina GGTTGTTTCT 5.5 0.0055 P0.5 retina GGTTGTTTCT GTCAGGGGGC (2) 15.7 0.0157 P2.5 retina GGTTGTTTCT GTCAGGGGGC (2) 12.4 0.0124 P4.5 retina GTCAGGGGGC (2) 2 0.002 P6.5 retina GGTTGTTTCT GTCAGGGGGC (2) 13.3 0.0133 P10.5 crx- retina GGTTGTTTCT 3.7 0.0037 P10.5 crx+ retina GACTCCCGGC GGTTGTTTCT GTCAGGGGGC (2) 17.3 0.0173 Adult retinal GGTTGTTTCT 1.9 0.0019 ONL GAGTGTTAGA GGTTGTTTCT 3.8 0.0038