Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6306	Atp2a3	ATPase, Ca++ transporting, ubiquitous	11		53313
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | calcium ion binding | calcium ion transport | calcium-transporting ATPase activity | catalytic activity | cation transport | endoplasmic reticulum | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism
Human Homolog	ATP2A3[ATPase, Ca++ transporting, ubiquitous]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGCCCAAG (6) 3.3 0.0033 P8 Cb GC GCCAGAGCAG (4) 1.6 0.0016 P8 Cb GC GCTGTCCTCA (4) 1.6 0.0016 P8 Cb GC GGATGAAAAA (9) 1.6 0.0016 Cb medulloblastoma GCTGTCCTCA (4) 6.9 0.0069 Cb medulloblastoma CCACCCTGGC (4) 4.6 0.0046 Cb medulloblastoma GAGGCCCAAG (6) 2.3 0.0023 Cb medulloblastoma GATGAAAAAA (9) 2.3 0.0023 Cb medulloblastoma GCCAGAGCAG (4) 2.3 0.0023 P8 GC+1d culture GAGGCCCAAG (6) 4.6 0.0046 P8 GC+1d culture GGCTCTGCAT (3) 2.3 0.0023 P8 GC+1d culture GGATGAAAAA (9) 1.1 0.0011 P8 GC+SHH+1d culture GAGGCCCAAG (6) 3.5 0.0035 P8 GC+SHH+1d culture CCACCCTGGC (4) 1.2 0.0012 P8 GC+SHH+1d culture GATGAAAAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GGCTCTGCAT (3) 1.2 0.0012 3T3 fibroblasts GAGGCCCAAG (6) 7 0.007 3T3 fibroblasts GCTGTCCTCA (4) 3.5 0.0035 E15 cortex GAGGCCCAAG (6) 4.9 0.0049 P1 cortex CCACCCTGGC (4) 4.5 0.0045 Hypothalamus GCTGTCCTCA (4) 3.6 0.0036 Hypothalamus CCACCCTGGC (4) 1.8 0.0018 Hypothalamus GAGGCCCAAG (6) 1.8 0.0018 Hypothalamus GATGAAAAAA (9) 1.8 0.0018 E12.5 retina GAGGCCCAAG (6) 1.9 0.0019 E14.5 retina GAGGCCCAAG (6) 3.6 0.0036 E16.5 retina CCACCCTGGC (4) 1.8 0.0018 E16.5 retina GCCAGAGCAG (4) 1.8 0.0018 E18.5 retina GGATGAAAAA (9) 1.8 0.0018 P0.5 retina GAGGCCCAAG (6) 5.9 0.0059 P0.5 retina GATGAAAAAA (9) 2 0.002 P0.5 retina GCTGTCCTCA (4) 2 0.002 P2.5 retina GAGGAGGGGC (6) 1.8 0.0018 P2.5 retina GAGGCCCAAG (6) 1.8 0.0018 P4.5 retina GAGGCCCAAG (6) 2 0.002 P6.5 retina GAGGCCCAAG (6) 10 0.01 P6.5 retina GAGGAGGGGC (6) 1.7 0.0017 P6.5 retina GGCTCTGCAT (3) 1.7 0.0017 P10.5 crx- retina GAGGCCCAAG (6) 3.7 0.0037 P10.5 crx+ retina GAGGCCCAAG (6) 11.5 0.0115 P10.5 crx+ retina GAGGAGGGGC (6) 1.9 0.0019 P10.5 crx+ retina GCTGTCCTCA (4) 1.9 0.0019 Adult retinal GAGGCCCAAG (6) 5.6 0.0056 Adult retinal GCTGTCCTCA (4) 3.7 0.0037 Adult retinal GCCAGAGCAG (4) 1.9 0.0019 ONL GAGGCCCAAG (6) 5.7 0.0057 ONL GGATGAAAAA (9) 1.9 0.0019