Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.64104
2410016F19Rik
RIKEN cDNA 2410016F19 gene
10
67371
Human Homolog
C6orf51[chromosome 6 open reading frame 51]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 84 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CCTTTAATCT (
38
)
4.9
0.0049
P8 Cb GC
ACAAGGACGC
1.6
0.0016
P8 Cb GC
GGAACTCAAG
(
2
)
1.6
0.0016
P8 Cb GC
TCGGCCGCCC (
15
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AGAGAGAGCA
(
5
)
2.3
0.0023
Cb medulloblastoma
GGAACTCAAG
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GGAACTCAAG
(
2
)
4.6
0.0046
P8 GC+1d culture
CCTTTAATCT (
38
)
1.1
0.0011
P8 GC+1d culture
CCTTTTAATC (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GGAACTCAAG
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
CCTTTAATCT (
38
)
3.5
0.0035
P8 GC+SHH+1d culture
TCGGCCGCCC (
15
)
2.3
0.0023
P8 GC+SHH+1d culture
CAATATACTT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CCTTTTAATC (
5
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CCTTTAATCT (
38
)
10.5
0.0105
3T3 fibroblasts
TGGTGCTGGG
(
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AGAGAGAGCA
(
5
)
4.9
0.0049
E15 cortex
GGAACTCAAG
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AGAGAGAGCA
(
5
)
4.5
0.0045
P1 cortex
CCTTTAATCT (
38
)
4.5
0.0045
P1 cortex
CCTTTTAATC (
5
)
4.5
0.0045
P1 cortex
GGAACTCAAG
(
2
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GGAACTCAAG
(
2
)
7.2
0.0072
Hypothalamus
ACAAGGACGC
1.8
0.0018
Hypothalamus
CCTTTAATCT (
38
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GGAACTCAAG
(
2
)
3.8
0.0038
E12.5 retina
CCTTTAATCT (
38
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CCTTTAATCT (
38
)
12.8
0.0128
E14.5 retina
GGAACTCAAG
(
2
)
9.1
0.0091
E14.5 retina
TCGGCCGCCC (
15
)
3.6
0.0036
E14.5 retina
TGGTGCTGGG
(
6
)
3.6
0.0036
E14.5 retina
CAATATACTT
(
2
)
1.8
0.0018
E14.5 retina
CCTTTTAATC (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GGAACTCAAG
(
2
)
5.4
0.0054
E16.5 retina
TGGTGCTGGG
(
6
)
3.6
0.0036
E16.5 retina
ACAAGGACGC
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GGAACTCAAG
(
2
)
7.3
0.0073
E18.5 retina
TGGTGCTGGG
(
6
)
3.6
0.0036
E18.5 retina
ACAAGGACGC
1.8
0.0018
E18.5 retina
CAATATACTT
(
2
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CCTTTAATCT (
38
)
2
0.002
P0.5 retina
CCTTTTAATC (
5
)
2
0.002
P0.5 retina
GGAACTCAAG
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCTTTAATCT (
38
)
3.5
0.0035
P2.5 retina
CCTTTTAATC (
5
)
3.5
0.0035
P2.5 retina
GGAACTCAAG
(
2
)
3.5
0.0035
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GGAACTCAAG
(
2
)
5.9
0.0059
P4.5 retina
CCTTTAATCT (
38
)
4
0.004
P4.5 retina
CCTTTTAATC (
5
)
4
0.004
P4.5 retina
TGGTGCTGGG
(
6
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CCTTTAATCT (
38
)
11.7
0.0117
P6.5 retina
GGAACTCAAG
(
2
)
6.7
0.0067
P6.5 retina
CCTTTTAATC (
5
)
1.7
0.0017
P6.5 retina
TCGGCCGCCC (
15
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCTTTTAATC (
5
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CCTTTTAATC (
5
)
3.8
0.0038
P10.5 crx+ retina
CAATATACTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGAACTCAAG
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTTTAATCT (
38
)
7.4
0.0074
Adult retinal
CCTTTTAATC (
5
)
3.7
0.0037
Adult retinal
TGGTGCTGGG
(
6
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CCTTTAATCT (
38
)
11.5
0.0115
ONL
TGGTGCTGGG
(
6
)
3.8
0.0038
ONL
GGAACTCAAG
(
2
)
1.9
0.0019
