Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.64962
1810057P16Rik
RIKEN cDNA 1810057P16 gene
11
67622
Human Homolog
FLJ46603[FLJ46603 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 17 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
AGCACTTGCC (
2
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
AGCACTTGCC (
2
)
3.4
0.0034
P8 GC+1d culture
TGGCTCTGTG
(
7
)
2.3
0.0023
P8 GC+1d culture
ACAACTCTGA
1.1
0.0011
P8 GC+1d culture
GCTTGTGGGC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
GCTTGTGGGC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCACTTGCC (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCTCTGTG
(
7
)
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GCTTGTGGGC
(
2
)
7
0.007
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
AGCACTTGCC (
2
)
3.6
0.0036
Hypothalamus
TGTGTGCTAA
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
GCTTGTGGGC
(
2
)
3.8
0.0038
E12.5 retina
AGCACTTGCC (
2
)
1.9
0.0019
E12.5 retina
TCAGGCATTA
(
4
)
1.9
0.0019
E12.5 retina
TGGCTCTGTG
(
7
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
AGCACTTGCC (
2
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
GCTTGTGGGC
(
2
)
7.2
0.0072
E16.5 retina
ACAACTCTGA
1.8
0.0018
E16.5 retina
AGCACTTGCC (
2
)
1.8
0.0018
E16.5 retina
TGGCTCTGTG
(
7
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
TGGCTCTGTG
(
7
)
9.1
0.0091
E18.5 retina
GCTTGTGGGC
(
2
)
7.3
0.0073
E18.5 retina
ACAACTCTGA
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
GCTTGTGGGC
(
2
)
17.7
0.0177
P0.5 retina
TGGCTCTGTG
(
7
)
7.9
0.0079
P0.5 retina
ACAACTCTGA
5.9
0.0059
P0.5 retina
TCAGGCATTA
(
4
)
5.9
0.0059
P0.5 retina
TGTGTGCTAA
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
GCTTGTGGGC
(
2
)
29.9
0.0299
P2.5 retina
TGGCTCTGTG
(
7
)
10.6
0.0106
P2.5 retina
TCAGGCATTA
(
4
)
7
0.007
P2.5 retina
AGCACTTGCC (
2
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
GCTTGTGGGC
(
2
)
29.7
0.0297
P4.5 retina
TGGCTCTGTG
(
7
)
11.9
0.0119
P4.5 retina
ACAACTCTGA
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
GCTTGTGGGC
(
2
)
23.3
0.0233
P6.5 retina
ACAACTCTGA
6.7
0.0067
P6.5 retina
TGGCTCTGTG
(
7
)
6.7
0.0067
P6.5 retina
AGCACTTGCC (
2
)
1.7
0.0017
P6.5 retina
TCAGGCATTA
(
4
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GCTTGTGGGC
(
2
)
11.1
0.0111
P10.5 crx- retina
AGCACTTGCC (
2
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
AGCACTTGCC (
2
)
5.8
0.0058
P10.5 crx+ retina
GCTTGTGGGC
(
2
)
3.8
0.0038
P10.5 crx+ retina
TCAGGCATTA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGGCTCTGTG
(
7
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
GCTTGTGGGC
(
2
)
13
0.013
Adult retinal
TCAGGCATTA
(
4
)
7.4
0.0074
Adult retinal
TGGCTCTGTG
(
7
)
3.7
0.0037
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
TGGCTCTGTG
(
7
)
3.8
0.0038
ONL
AGCACTTGCC (
2
)
1.9
0.0019
ONL
GCTTGTGGGC
(
2
)
1.9
0.0019
ONL
TGTGTGCTAA
1.9
0.0019
