| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCAGGCAAGC (9) GACATTAGTC (3) TCAGCTAAGT (3)
| 14.6 | 0.0146 |
| Cb medulloblastoma | CTACAAAACG (3) GACATTAGTC (3) TCATTTTTAC (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | CTACAAAACG (3) CTACAAAGGG (4) GACATTAGTC (3)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | CTACAAAACG (3) GACATTAGTC (3) TCATTTTTAC (3)
| 5.9 | 0.0059 |
| 3T3 fibroblasts | CCAGGCAAGC (9) GACATTAGTC (3)
| 7 | 0.007 |
| E15 cortex | GACATTAGTC (3)
| 9.9 | 0.0099 |
| P1 cortex | CTAATGGAAA (4) GACATTAGTC (3) TCAGCTAAGT (3)
| 22.6 | 0.0226 |
| Hypothalamus | CTAATGGAAA (4) GACATTAGTC (3) TCAGCTAAGT (3)
| 7.2 | 0.0072 |
| E12.5 retina | CCAGGCAAGC (9) GACATTAGTC (3)
| 3.8 | 0.0038 |
| E14.5 retina | GACATTAGTC (3)
| 3.6 | 0.0036 |
| E16.5 retina | CTACAAAACG (3) GACATTAGTC (3)
| 16.3 | 0.0163 |
| E18.5 retina | CTAATGGAAA (4) GACATTAGTC (3)
| 7.3 | 0.0073 |
| P0.5 retina | CTACAAAGGG (4) GACATTAGTC (3)
| 5.9 | 0.0059 |
| P2.5 retina | CCAGGCAAGC (9) GACATTAGTC (3)
| 8.8 | 0.0088 |
| P4.5 retina | GACATTAGTC (3)
| 5.9 | 0.0059 |
| P6.5 retina | CTACAAAACG (3) GACATTAGTC (3)
| 6.7 | 0.0067 |
| P10.5 crx- retina | CTACAAAGGG (4) GACATTAGTC (3)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GACATTAGTC (3)
| 1.9 | 0.0019 |
| Adult retinal | GACATTAGTC (3)
| 1.9 | 0.0019 |
| ONL | CTACAAAGGG (4)
| 1.9 | 0.0019 |