Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.6534 Capns1calpain, small subunit 1 7  7 9.5 cM  12336 
 Gene Ontology calcium ion binding | calpain activity
 Human Homolog CAPNS1[calpain, small subunit 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAGCTCTAAAA1.60.0016
P8 Cb GCCCACACCTTG1.60.0016
P8 Cb GCGCAGGTCCAC1.60.0016
Cb medulloblastomaGCAGGTCCAC9.20.0092
Cb medulloblastomaAGCTCTAAAA6.90.0069
Cb medulloblastomaAGCTCTATAG4.60.0046
Cb medulloblastomaCCACACCTTG2.30.0023
Cb medulloblastomaTTCCGCGCTT2.30.0023
P8 GC+1d cultureGCAGGTCCAC22.80.0228
P8 GC+1d cultureAGCTCTAAAA6.80.0068
P8 GC+1d cultureTTCCTGCTAC (3)4.60.0046
P8 GC+1d cultureAGCTCTATAG1.10.0011
P8 GC+1d cultureCCCCACCTTG1.10.0011
P8 GC+SHH+1d cultureGCAGGTCCAC12.90.0129
P8 GC+SHH+1d cultureTTCCTGCTAC (3)8.20.0082
P8 GC+SHH+1d cultureAGCTCTATAG2.30.0023
P8 GC+SHH+1d cultureAGCTCTAAAA1.20.0012
3T3 fibroblastsGCAGGTCCAC10.50.0105
3T3 fibroblastsAGCTCTAAAA3.50.0035
3T3 fibroblastsAGCTCTATAG3.50.0035
E15 cortexAGCTCTATAG4.90.0049
P1 cortexAGCTCTATAG4.50.0045
P1 cortexGCAGGTCCAC4.50.0045
HypothalamusGCAGGTCCAC21.70.0217
HypothalamusTTCCTGCTAC (3)5.40.0054
HypothalamusAGCTCTAAAA3.60.0036
HypothalamusCCACACCTTG1.80.0018
HypothalamusTTCCGCGCTT1.80.0018
E12.5 retinaGCAGGTCCAC5.60.0056
E12.5 retinaAGCTCTAAAA1.90.0019
E12.5 retinaTTCCTGCTAC (3)1.90.0019
E14.5 retinaTTCCTGCTAC (3)12.80.0128
E14.5 retinaGCAGGTCCAC5.50.0055
E14.5 retinaAGCTCTATAG3.60.0036
E14.5 retinaAGCTCTAAAA1.80.0018
E16.5 retinaGCAGGTCCAC10.90.0109
E16.5 retinaTTCCTGCTAC (3)5.40.0054
E16.5 retinaAGCTCTAAAA3.60.0036
E16.5 retinaCCCCACCTTG1.80.0018
E16.5 retinaTTCCGCGCTT1.80.0018
E18.5 retinaGCAGGTCCAC10.90.0109
E18.5 retinaAGCTCTAAAA5.50.0055
P0.5 retinaGCAGGTCCAC3.90.0039
P0.5 retinaTTCCTGCTAC (3)20.002
P2.5 retinaAGCTCTAAAA70.007
P2.5 retinaGCAGGTCCAC3.50.0035
P2.5 retinaAGCTCTATAG1.80.0018
P2.5 retinaTTCCTGCTAC (3)1.80.0018
P4.5 retinaGCAGGTCCAC19.80.0198
P4.5 retinaAGCTCTAAAA7.90.0079
P4.5 retinaAGCTCTATAG40.004
P4.5 retinaTTCCTGCTAC (3)20.002
P6.5 retinaGCAGGTCCAC8.30.0083
P6.5 retinaAGCTCTATAG50.005
P6.5 retinaTTCCTGCTAC (3)3.30.0033
P10.5 crx- retinaGCAGGTCCAC7.40.0074
P10.5 crx- retinaTTCCTGCTAC (3)1.90.0019
P10.5 crx+ retinaGCAGGTCCAC15.40.0154
P10.5 crx+ retinaAGCTCTAAAA5.80.0058
P10.5 crx+ retinaAGCTCTATAG1.90.0019
P10.5 crx+ retinaTTCCTGCTAC (3)1.90.0019
Adult retinalGCAGGTCCAC9.30.0093
ONLAGCTCTAAAA1.90.0019
ONLCCACACCTTG1.90.0019
ONLCCCCACCTTG1.90.0019