Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.65979	5730526G10Rik	RIKEN cDNA 5730526G10 gene	12		70656
Mm.65979	Strn3	striatin, calmodulin binding protein 3	12		94186
Gene Ontology	calmodulin binding
Human Homolog	STRN3[striatin, calmodulin binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCAGGACT (2) ATTAAGACAA (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 19.6 0.0196 Cb medulloblastoma ATTAAGACAA (2) GTAGCCTTGA (3) GTGTAGATGC (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 87.8 0.0878 P8 GC+1d culture AACCAGGACT (2) ATTAAGACAA (2) GTAAATCAAG (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 15.8 0.0158 P8 GC+SHH+1d culture AACCAGGACT (2) ATTAAGACAA (2) ATTCCAAAAC (2) GAATACCTAA TAGACAAAGG (3) TGTTTTGGAA 21.1 0.0211 3T3 fibroblasts GTAGCCTTGA (3) GTGTAGATGC (2) TGATCTGCCT (5) TGTTTTGGAA 49 0.049 E15 cortex TGATCTGCCT (5) TGTTTTGGAA 24.7 0.0247 P1 cortex ATTAAGACAA (2) CATCACACAA (2) GTGTAGATGC (2) 18.1 0.0181 Hypothalamus TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 52.5 0.0525 E12.5 retina AACCAGGACT (2) AAGGTGCAAG (2) CATTACACAA (3) GAATACCTAA TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 28.3 0.0283 E14.5 retina ATTAAGACAA (2) ATTCCAAAAC (2) CATCACACAA (2) GTAGCCTTGA (3) TAGACAAAGG (3) TGTTTTGGAA 36.4 0.0364 E16.5 retina AACCAGGACT (2) GAATACCTAA GTGTAGATGC (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 41.6 0.0416 E18.5 retina AACCAGGACT (2) AAGGTGCAAG (2) ATTAAGACAA (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 32.6 0.0326 P0.5 retina AACCAGGACT (2) ATTAAGACAA (2) CATCACACAA (2) GAATACCTAA TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 25.6 0.0256 P2.5 retina AACCAGGACT (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 26.5 0.0265 P4.5 retina AACCAGGACT (2) ATTAAGACAA (2) CATCACACAA (2) CATTACACAA (3) TAGACAAAGG (3) TGTTTTGGAA 45.7 0.0457 P6.5 retina AACCAGGACT (2) ATTAAGACAA (2) GTGTAGATGC (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 35.1 0.0351 P10.5 crx- retina AACCAGGACT (2) ATTCCAAAAC (2) CATCACACAA (2) TAGACAAAGG (3) TGATCTGCCT (5) TGTTTTGGAA 44.7 0.0447 P10.5 crx+ retina TAGACAAAGG (3) TGTTTTGGAA 28.8 0.0288 Adult retinal AACCAGGACT (2) AAGGTGCAAG (2) CATCACACAA (2) GTGTAGATGC (2) TAGACAAAGG (3) TGTTTTGGAA 28 0.028 ONL GTAAATCAAG (2) TAGACAAAGG (3) TGTTTTGGAA 11.5 0.0115