Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.661	Tnp1	transition protein 1	1	1 38.4 cM	21958
Gene Ontology	chromosome | chromosome organization and biogenesis (sensu Eukarya) | DNA binding | male germ cell nucleus | nucleosome | nucleus | spermatogenesis
Human Homolog	TNP1[transition protein 1 (during histone to protamine replacement)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (2) 4.9 0.0049 Cb medulloblastoma ATGACATCAC (3) TTTTTTTTTT (2) 4.6 0.0046 P8 GC+1d culture TTTTTTTTTT (2) 13.7 0.0137 P8 GC+SHH+1d culture TTTTTTTTTT (2) 5.9 0.0059 E15 cortex TTTTTTTTTT (2) 4.9 0.0049 P1 cortex TTTTTTTTTT (2) 4.5 0.0045 Hypothalamus TTTTTTTTTT (2) 7.2 0.0072 E12.5 retina TTTTTTTTTT (2) 7.5 0.0075 E14.5 retina TTTTTTTTTT (2) 23.7 0.0237 E16.5 retina ATGACATCAC (3) TTTTTTTTTT (2) 7.2 0.0072 E18.5 retina ATGACATCAC (3) TTTTTTTTTT (2) 12.7 0.0127 P0.5 retina TTTTTTTTTT (2) 9.8 0.0098 P2.5 retina TTTTTTTTTT (2) 7 0.007 P4.5 retina TTTTTTTTTT (2) 9.9 0.0099 P6.5 retina TTTTTTTTTT (2) 8.3 0.0083 P10.5 crx- retina ATGACATCAC (3) 1.9 0.0019 P10.5 crx+ retina ATGACATCAC (3) TTTTTTTTTT (2) 5.7 0.0057 Adult retinal ATGACATCAC (3) TTTTTTTTTT (2) 9.3 0.0093 ONL TTTTTTTTTT (2) 3.8 0.0038