Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6635	Ivd	isovaleryl coenzyme A dehydrogenase	2		56357
Gene Ontology	isovaleryl-CoA dehydrogenase activity | mitochondrion | mitochondrion | oxidoreductase activity
Human Homolog	IVD[isovaleryl Coenzyme A dehydrogenase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCTGAAAA (5) 4.9 0.0049 P8 Cb GC GGGGGAGGGA (9) 4.9 0.0049 P8 Cb GC TTGGAGAAGG (4) 3.3 0.0033 P8 Cb GC GCCCCCTGAT (3) 1.6 0.0016 P8 Cb GC TGACCTTCTG (2) 1.6 0.0016 Cb medulloblastoma TTGGAGAAGG (4) 27.7 0.0277 Cb medulloblastoma AATCTGAAAA (5) 6.9 0.0069 Cb medulloblastoma AGCTATAATT 4.6 0.0046 Cb medulloblastoma TGACCTTCTG (2) 2.3 0.0023 P8 GC+1d culture AATCTGAAAA (5) 4.6 0.0046 P8 GC+1d culture GGGGGAGGGA (9) 4.6 0.0046 P8 GC+1d culture TTGGAGAAGG (4) 4.6 0.0046 P8 GC+1d culture AGCTATAATT 1.1 0.0011 P8 GC+SHH+1d culture AATCTGAAAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GGGGGAGGGA (9) 1.2 0.0012 P8 GC+SHH+1d culture TGACCTTCTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCACATACA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGAGAAGGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCATCT (7) 1.2 0.0012 P8 GC+SHH+1d culture TTGGAGAAGG (4) 1.2 0.0012 3T3 fibroblasts GCCCCCTGAT (3) 3.5 0.0035 3T3 fibroblasts GCTCCCCTCC 3.5 0.0035 3T3 fibroblasts GGGGGAGGGA (9) 3.5 0.0035 E15 cortex AATCTGAAAA (5) 4.9 0.0049 E15 cortex AGCTATAATT 4.9 0.0049 E15 cortex GCCCCCTGAT (3) 4.9 0.0049 P1 cortex TTGGAGAAGG (4) 9.1 0.0091 Hypothalamus TTGGAGAAGG (4) 7.2 0.0072 Hypothalamus AATCTGAAAA (5) 3.6 0.0036 Hypothalamus AGCTATAATT 3.6 0.0036 Hypothalamus GCCCCCTGAT (3) 1.8 0.0018 Hypothalamus TGGCTCATCT (7) 1.8 0.0018 E12.5 retina AATCTGAAAA (5) 1.9 0.0019 E12.5 retina AGCTATAATT 1.9 0.0019 E12.5 retina GCTCCCCTCC 1.9 0.0019 E12.5 retina TGACCTTCTG (2) 1.9 0.0019 E14.5 retina AATCTGAAAA (5) 12.8 0.0128 E14.5 retina AGCTATAATT 3.6 0.0036 E14.5 retina GCCCCCTGAT (3) 1.8 0.0018 E14.5 retina GCTCCCCTCC 1.8 0.0018 E14.5 retina GGGGGAGGGA (9) 1.8 0.0018 E16.5 retina AATCTGAAAA (5) 10.9 0.0109 E16.5 retina AGCTATAATT 1.8 0.0018 E16.5 retina GCCCCCTGAT (3) 1.8 0.0018 E16.5 retina TGACCTTCTG (2) 1.8 0.0018 E16.5 retina TTGGAGAAGG (4) 1.8 0.0018 E18.5 retina AATCTGAAAA (5) 16.4 0.0164 E18.5 retina TGACCTTCTG (2) 3.6 0.0036 E18.5 retina TTGGAGAAGG (4) 1.8 0.0018 P0.5 retina AATCTGAAAA (5) 3.9 0.0039 P0.5 retina GCCCCCTGAT (3) 2 0.002 P0.5 retina TTGGAGAAGG (4) 2 0.002 P2.5 retina AATCTGAAAA (5) 5.3 0.0053 P2.5 retina TGACCTTCTG (2) 3.5 0.0035 P2.5 retina TGGAGAAGGG (4) 1.8 0.0018 P2.5 retina TTGGAGAAGG (4) 1.8 0.0018 P4.5 retina AATCTGAAAA (5) 9.9 0.0099 P4.5 retina TTGGAGAAGG (4) 5.9 0.0059 P4.5 retina AGCTATAATT 2 0.002 P4.5 retina GGGGGAGGGA (9) 2 0.002 P4.5 retina TGACCTTCTG (2) 2 0.002 P4.5 retina TGGAGAAGGG (4) 2 0.002 P4.5 retina TGGCTCATCT (7) 2 0.002 P6.5 retina AATCTGAAAA (5) 8.3 0.0083 P6.5 retina GGGGGAGGGA (9) 6.7 0.0067 P6.5 retina TGACCTTCTG (2) 3.3 0.0033 P6.5 retina TTGGAGAAGG (4) 1.7 0.0017 P10.5 crx- retina AATCTGAAAA (5) 1.9 0.0019 P10.5 crx- retina AGCTATAATT 1.9 0.0019 P10.5 crx- retina TTGGAGAAGG (4) 1.9 0.0019 P10.5 crx+ retina AATCTGAAAA (5) 7.7 0.0077 P10.5 crx+ retina CCAAGTGTCC (2) 1.9 0.0019 P10.5 crx+ retina GCTCCCCTCC 1.9 0.0019 P10.5 crx+ retina GGGGGAGGGA (9) 1.9 0.0019 P10.5 crx+ retina TTGGAGAAGG (4) 1.9 0.0019 Adult retinal CCAAGTGTCC (2) 5.6 0.0056 Adult retinal TTGGAGAAGG (4) 3.7 0.0037 Adult retinal GCTCCCCTCC 1.9 0.0019 ONL AATCTGAAAA (5) 5.7 0.0057 ONL CCAAGTGTCC (2) 5.7 0.0057 ONL TGCACATACA (6) 3.8 0.0038 ONL AGCTATAATT 1.9 0.0019