Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6670	Prkag1	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	15	15 53.0 cM	19082
Gene Ontology	fatty acid biosynthesis | kinase activity | nucleus | response to stress | SNF1A/AMP-activated protein kinase activity
Human Homolog	PRKAG1[protein kinase, AMP-activated, gamma 1 non-catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAAAAAAA (2) 55.5 0.0555 Cb medulloblastoma GTAAAAAAAA (2) 129.5 0.1295 Cb medulloblastoma CTGACCATCA (2) 2.3 0.0023 P8 GC+1d culture GTAAAAAAAA (2) 74.2 0.0742 P8 GC+SHH+1d culture GTAAAAAAAA (2) 132.3 0.1323 3T3 fibroblasts GTAAAAAAAA (2) 7 0.007 E15 cortex GTAAAAAAAA (2) 34.6 0.0346 P1 cortex GTAAAAAAAA (2) 36.4 0.0364 Hypothalamus GTAAAAAAAA (2) 99.6 0.0996 Hypothalamus AGTCTAGGGA 1.8 0.0018 E12.5 retina GTAAAAAAAA (2) 41.3 0.0413 E12.5 retina ATGAAACCTT 1.9 0.0019 E14.5 retina GTAAAAAAAA (2) 82 0.082 E14.5 retina ATGAAACCTT 3.6 0.0036 E14.5 retina AGTCTAGGGA 1.8 0.0018 E14.5 retina CTGACCATCA (2) 1.8 0.0018 E16.5 retina GTAAAAAAAA (2) 68.8 0.0688 E16.5 retina CTGACCATCA (2) 1.8 0.0018 E18.5 retina GTAAAAAAAA (2) 189.2 0.1892 E18.5 retina ATGAAACCTT 1.8 0.0018 E18.5 retina GGAAGGACTG (2) 1.8 0.0018 E18.5 retina GGAAGGAGTG (4) 1.8 0.0018 P0.5 retina GTAAAAAAAA (2) 51 0.051 P2.5 retina GTAAAAAAAA (2) 103.8 0.1038 P4.5 retina GTAAAAAAAA (2) 142.7 0.1427 P4.5 retina ATGAAACCTT 2 0.002 P4.5 retina GGAAGGAGTG (4) 2 0.002 P6.5 retina GTAAAAAAAA (2) 66.7 0.0667 P10.5 crx- retina GTAAAAAAAA (2) 26 0.026 P10.5 crx- retina GGAAGGAGTG (4) 1.9 0.0019 P10.5 crx+ retina GTAAAAAAAA (2) 55.8 0.0558 Adult retinal GTAAAAAAAA (2) 22.2 0.0222 Adult retinal AGTCTAGGGA 1.9 0.0019 Adult retinal GGAAGGACTG (2) 1.9 0.0019 ONL GTAAAAAAAA (2) 24.9 0.0249 ONL GGAAGGACTG (2) 1.9 0.0019 ONL GGAAGGAGTG (4) 1.9 0.0019