Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6836	Arf1	ADP-ribosylation factor 1	11		11840
Gene Ontology	Golgi apparatus | Golgi apparatus | GTP binding | GTP binding | GTPase activity | intracellular protein transport | plasma membrane | protein transport | protein transport | protein transporter activity | receptor signaling protein activity | small GTPase mediated signal transduction | transporter activity
Human Homolog	ARF1[ADP-ribosylation factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGAAGTAG (2) 11.4 0.0114 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC TGCAGACGCA 6.5 0.0065 P8 Cb GC AAGATGAGCT (4) 3.3 0.0033 P8 Cb GC AAAAGGGCTC 1.6 0.0016 P8 Cb GC AGGATGCTAG (2) 1.6 0.0016 P8 Cb GC AGGGTGCTAG (2) 1.6 0.0016 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma CCCCTTAAAA (4) 6.9 0.0069 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma GAGATGGGGG (7) 4.6 0.0046 Cb medulloblastoma GCTGGGCCTG (5) 2.3 0.0023 Cb medulloblastoma GTGGGCCTGG (6) 2.3 0.0023 Cb medulloblastoma TGCAGACGCA 2.3 0.0023 Cb medulloblastoma TGGCAACGTG (2) 2.3 0.0023 Cb medulloblastoma TGTGAAGTAG (2) 2.3 0.0023 P8 GC+1d culture TGTGAAGTAG (2) 34.2 0.0342 P8 GC+1d culture TGGCAACGTG (2) 6.8 0.0068 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture ATCCAAACCC (2) 3.4 0.0034 P8 GC+1d culture AAAAGGGCTC 2.3 0.0023 P8 GC+1d culture GAAAAGGGGG (3) 1.1 0.0011 P8 GC+1d culture GAGATGGGGG (7) 1.1 0.0011 P8 GC+SHH+1d culture TGTGAAGTAG (2) 31.6 0.0316 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture TGGCAACGTG (2) 5.9 0.0059 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture CAGCGGATGG (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGATGAGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture ATCCAAACCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGATGGGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGCCTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGACGCA 1.2 0.0012 P8 GC+SHH+1d culture TGGCATAACC (3) 1.2 0.0012 3T3 fibroblasts CAGCGGATGG (2) 17.5 0.0175 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts TGCAGACGCA 3.5 0.0035 3T3 fibroblasts TGTGAAGTAG (2) 3.5 0.0035 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex TGTGAAGTAG (2) 4.9 0.0049 P1 cortex TGTGAAGTAG (2) 18.2 0.0182 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex AAAAGGGCTC 4.5 0.0045 P1 cortex ATCCAAACCC (2) 4.5 0.0045 P1 cortex CATTTTAAAA (8) 4.5 0.0045 Hypothalamus TGTGAAGTAG (2) 12.7 0.0127 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TGGCAACGTG (2) 5.4 0.0054 Hypothalamus GAGATGGGGG (7) 3.6 0.0036 Hypothalamus ATCCAAACCC (2) 1.8 0.0018 Hypothalamus CCCCTTAAAA (4) 1.8 0.0018 Hypothalamus GCTGGGCCTG (5) 1.8 0.0018 Hypothalamus TGGCATAACC (3) 1.8 0.0018 E12.5 retina TGTGAAGTAG (2) 20.7 0.0207 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina AAAAGGGCTC 1.9 0.0019 E12.5 retina CAGCGGATGG (2) 1.9 0.0019 E12.5 retina GAGATGGGGG (7) 1.9 0.0019 E12.5 retina GTGCGCCTGG (5) 1.9 0.0019 E12.5 retina TGGCAACGTG (2) 1.9 0.0019 E12.5 retina TGGCATAACC (3) 1.9 0.0019 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina TGTGAAGTAG (2) 7.3 0.0073 E14.5 retina AAGATGAGCT (4) 1.8 0.0018 E14.5 retina GTGGGGCTGG (2) 1.8 0.0018 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina TGTGAAGTAG (2) 7.2 0.0072 E16.5 retina AGGGTGCTAG (2) 3.6 0.0036 E16.5 retina ATCCAAACCC (2) 3.6 0.0036 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina AGGATGCTAG (2) 1.8 0.0018 E16.5 retina AGGATGGTAG (3) 1.8 0.0018 E16.5 retina CAGCGGATGG (2) 1.8 0.0018 E16.5 retina GAGATGGGGG (7) 1.8 0.0018 E16.5 retina TGGCATAACC (3) 1.8 0.0018 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina TGTGAAGTAG (2) 7.3 0.0073 E18.5 retina GAGATGGGGG (7) 3.6 0.0036 E18.5 retina TGGCATAACC (3) 3.6 0.0036 E18.5 retina CATTTTAAAA (8) 1.8 0.0018 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina GTGGGCCTGG (6) 1.8 0.0018 E18.5 retina TGCAGACGCA 1.8 0.0018 E18.5 retina TGGCAACGTG (2) 1.8 0.0018 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina TGTGAAGTAG (2) 7.9 0.0079 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina TGGCAACGTG (2) 3.9 0.0039 P0.5 retina CAGCGGATGG (2) 2 0.002 P0.5 retina CATTTTAAAA (8) 2 0.002 P0.5 retina GTGGGCCTGG (6) 2 0.002 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TGTGAAGTAG (2) 17.6 0.0176 P2.5 retina TGGCAACGTG (2) 3.5 0.0035 P2.5 retina CAGCGGATGG (2) 1.8 0.0018 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina TGCAGACGCA 1.8 0.0018 P4.5 retina TGTGAAGTAG (2) 23.8 0.0238 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina TGGCAACGTG (2) 7.9 0.0079 P4.5 retina CATTTTAAAA (8) 5.9 0.0059 P4.5 retina AGGGTGCTAG (2) 4 0.004 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina GAAAAGGGGG (3) 2 0.002 P4.5 retina GTGGGGCTGG (2) 2 0.002 P4.5 retina TGGCATAACC (3) 2 0.002 P4.5 retina TGGGCAAAAC (4) 2 0.002 P6.5 retina TGTGAAGTAG (2) 21.7 0.0217 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina CCCCTTAAAA (4) 3.3 0.0033 P6.5 retina AAAAGGGCTC 1.7 0.0017 P6.5 retina GAGATGGGGG (7) 1.7 0.0017 P6.5 retina TGGCAACGTG (2) 1.7 0.0017 P10.5 crx- retina TGTGAAGTAG (2) 33.4 0.0334 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina CATTTTAAAA (8) 3.7 0.0037 P10.5 crx- retina AGGATGCTAG (2) 1.9 0.0019 P10.5 crx- retina ATCCAAACCC (2) 1.9 0.0019 P10.5 crx- retina CAGCGGATGG (2) 1.9 0.0019 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina GTGGGCCTGG (6) 1.9 0.0019 P10.5 crx- retina TGGCAACGTG (2) 1.9 0.0019 P10.5 crx- retina TGGGCAAAAC (4) 1.9 0.0019 P10.5 crx+ retina TGTGAAGTAG (2) 28.8 0.0288 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina TGGCAACGTG (2) 5.8 0.0058 P10.5 crx+ retina GTGCGCCTGG (5) 3.8 0.0038 P10.5 crx+ retina AGGATGGTAG (3) 1.9 0.0019 P10.5 crx+ retina CCCCTTAAAA (4) 1.9 0.0019 P10.5 crx+ retina GAAAAGGGGG (3) 1.9 0.0019 P10.5 crx+ retina GTGGGCCTGG (6) 1.9 0.0019 P10.5 crx+ retina TGCAGACGCA 1.9 0.0019 Adult retinal TGTGAAGTAG (2) 25.9 0.0259 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal AGGATGGTAG (3) 1.9 0.0019 Adult retinal AGGGTGCTAG (2) 1.9 0.0019 Adult retinal ATCCAAACCC (2) 1.9 0.0019 Adult retinal CAGCGGATGG (2) 1.9 0.0019 Adult retinal CATTTTAAAA (8) 1.9 0.0019 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GAAAAGGGGG (3) 1.9 0.0019 Adult retinal TGGCAACGTG (2) 1.9 0.0019 Adult retinal TGGGCAAAAC (4) 1.9 0.0019 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL TGTGAAGTAG (2) 15.3 0.0153 ONL CCTTTAATTC (36) 3.8 0.0038 ONL GAAAAGGGGG (3) 1.9 0.0019 ONL GTGGGCCTGG (6) 1.9 0.0019 ONL GTGGGGCTGG (2) 1.9 0.0019