Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.689	Acvr1	activin A receptor, type 1	2		11477
Gene Ontology	ATP binding | embryonic development (sensu Mammalia) | embryonic morphogenesis | germ-cell development | heart development | integral to membrane | integral to plasma membrane | kinase activity | membrane | neural crest cell migration | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | receptor activity | receptor signaling protein serine/threonine kinase activity | transferase activity | transforming growth factor beta binding | transforming growth factor beta receptor activity | transforming growth factor beta receptor signaling pathway | transforming growth factor beta receptor signaling pathway | transmembrane receptor protein serine/threonine kinase activity | transmembrane receptor protein serine/threonine kinase signaling pathway | type I activin receptor activity | urogenital system development
Human Homolog	ACVR1[activin A receptor, type I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture CAACACCACC 3.4 0.0034 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture CAACACCAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CAACACCACC 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts CAACACCACC 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus CAACACCACC 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina CAACACCAAA (3) 1.8 0.0018 E14.5 retina TCCAGCTGGG (4) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina CAACACCAAA (3) 2 0.002 P0.5 retina CAACACCACC 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina CAACACCAAA (3) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TCCAGCTGGG (4) 3.3 0.0033 P6.5 retina CAACACCAAA (3) 1.7 0.0017 P6.5 retina CAACACCACC 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina CAACACCACC 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina CAACACCAAA (3) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal CAACACCACC 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL TGAAAAAAAA (81) 19.2 0.0192