Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.68933	Mapk9	mitogen activated protein kinase 9	11		26420
Gene Ontology	ATP binding | kinase activity | MAP kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	MAPK9[mitogen-activated protein kinase 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCACTTGG (3) 6.5 0.0065 P8 Cb GC TATTTTTATA (12) 4.9 0.0049 P8 Cb GC CTGCTTAAGA (3) 3.3 0.0033 P8 Cb GC TCCAATTCCT (2) 3.3 0.0033 P8 Cb GC TCTGCCCTCC (2) 1.6 0.0016 P8 Cb GC TGCTTTGATT (4) 1.6 0.0016 P8 Cb GC TGTAACTGTG (4) 1.6 0.0016 Cb medulloblastoma TCCAATTCCT (2) 6.9 0.0069 P8 GC+1d culture TAGCACTTGG (3) 8 0.008 P8 GC+1d culture TCCAATTCCT (2) 4.6 0.0046 P8 GC+1d culture TAAAGCTGGT 3.4 0.0034 P8 GC+1d culture TATGTTTATA (3) 3.4 0.0034 P8 GC+1d culture TAGCACTTTG 2.3 0.0023 P8 GC+1d culture TATTTTTATA (12) 2.3 0.0023 P8 GC+1d culture TGTAACTGTG (4) 2.3 0.0023 P8 GC+1d culture GCCACCTTCT (4) 1.1 0.0011 P8 GC+1d culture TCTGCCCTCC (2) 1.1 0.0011 P8 GC+1d culture TGACCACAAA 1.1 0.0011 P8 GC+SHH+1d culture TAGCACTTGG (3) 11.7 0.0117 P8 GC+SHH+1d culture TAGCACTTTG 2.3 0.0023 P8 GC+SHH+1d culture TATGTTTATA (3) 2.3 0.0023 P8 GC+SHH+1d culture TCTGCCCTCC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGTAACTGTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TATTTTTATA (12) 1.2 0.0012 3T3 fibroblasts GGAGAGCTGT (5) 14 0.014 3T3 fibroblasts GCCACCTTCT (4) 7 0.007 3T3 fibroblasts TAGCACTTGG (3) 3.5 0.0035 3T3 fibroblasts TAGCACTTTG 3.5 0.0035 3T3 fibroblasts TCCAATTCCT (2) 3.5 0.0035 3T3 fibroblasts TCTGCCCTCC (2) 3.5 0.0035 E15 cortex GGAGAGCTGT (5) 4.9 0.0049 E15 cortex TCCAATTCCT (2) 4.9 0.0049 P1 cortex GCCACCTTCT (4) 4.5 0.0045 P1 cortex TATGTTTATA (3) 4.5 0.0045 Hypothalamus TCTGCCCTCC (2) 5.4 0.0054 Hypothalamus TGCTTTGATT (4) 5.4 0.0054 Hypothalamus TGACCACAAA 3.6 0.0036 Hypothalamus TATTTTTATA (12) 1.8 0.0018 E12.5 retina TGTAACTGTG (4) 3.8 0.0038 E12.5 retina TCCACTGAGC (2) 1.9 0.0019 E12.5 retina TGCTTTGATT (4) 1.9 0.0019 E14.5 retina TGTAACTGTG (4) 5.5 0.0055 E14.5 retina TGCTTTGATT (4) 3.6 0.0036 E14.5 retina GCCACCTTCT (4) 1.8 0.0018 E14.5 retina GGCCCTTGCT (2) 1.8 0.0018 E14.5 retina TAAAGCTGGT 1.8 0.0018 E14.5 retina TAGCACTTTG 1.8 0.0018 E14.5 retina TATTTTTATA (12) 1.8 0.0018 E14.5 retina TCCAATTCCT (2) 1.8 0.0018 E16.5 retina GGCCCTTGCT (2) 10.9 0.0109 E16.5 retina TAGCACTTGG (3) 3.6 0.0036 E16.5 retina GGAGAGCTGT (5) 1.8 0.0018 E16.5 retina TATTTTTATA (12) 1.8 0.0018 E16.5 retina TCCAATTCCT (2) 1.8 0.0018 E16.5 retina TCCACTGAGC (2) 1.8 0.0018 E16.5 retina TCTGCCCTCC (2) 1.8 0.0018 E16.5 retina TGCTTTGATT (4) 1.8 0.0018 E18.5 retina TGCTTTGATT (4) 5.5 0.0055 E18.5 retina TAGCACTTGG (3) 3.6 0.0036 E18.5 retina TATTTTTATA (12) 3.6 0.0036 E18.5 retina GCCACCTTCT (4) 1.8 0.0018 E18.5 retina GGAGAGCTGT (5) 1.8 0.0018 E18.5 retina TCCAATTCCT (2) 1.8 0.0018 E18.5 retina TCTGCCCTCC (2) 1.8 0.0018 P0.5 retina GCCACCTTCT (4) 11.8 0.0118 P0.5 retina TAGCACTTGG (3) 5.9 0.0059 P0.5 retina TGCTTTGATT (4) 5.9 0.0059 P0.5 retina TAAGAAACAC (4) 2 0.002 P0.5 retina TATGTTTATA (3) 2 0.002 P0.5 retina TCCACTGAGC (2) 2 0.002 P0.5 retina TCTGCCCTCC (2) 2 0.002 P2.5 retina TAGCACTTGG (3) 5.3 0.0053 P2.5 retina TCCAATTCCT (2) 5.3 0.0053 P2.5 retina TGCTTTGATT (4) 5.3 0.0053 P2.5 retina TAGCACTTTG 3.5 0.0035 P2.5 retina TATTTTTATA (12) 3.5 0.0035 P2.5 retina TCTGCCCTCC (2) 3.5 0.0035 P2.5 retina GGCCCTTGCT (2) 1.8 0.0018 P4.5 retina TCCAATTCCT (2) 5.9 0.0059 P4.5 retina TGCTTTGATT (4) 5.9 0.0059 P4.5 retina TAGCACTTGG (3) 4 0.004 P4.5 retina TATTTTTATA (12) 2 0.002 P6.5 retina TCTGCCCTCC (2) 6.7 0.0067 P6.5 retina TCCAATTCCT (2) 3.3 0.0033 P6.5 retina TAAAGCTGGT 1.7 0.0017 P6.5 retina TAAGAAACAC (4) 1.7 0.0017 P6.5 retina TAGCACTTTG 1.7 0.0017 P6.5 retina TATGTTTATA (3) 1.7 0.0017 P6.5 retina TATTTTTATA (12) 1.7 0.0017 P6.5 retina TGCTTTGATT (4) 1.7 0.0017 P10.5 crx- retina TCCAATTCCT (2) 9.3 0.0093 P10.5 crx- retina TGCTTTGATT (4) 5.6 0.0056 P10.5 crx- retina TGTAACTGTG (4) 1.9 0.0019 P10.5 crx+ retina TCCAATTCCT (2) 7.7 0.0077 P10.5 crx+ retina TGCTTTGATT (4) 7.7 0.0077 P10.5 crx+ retina TAGCACTTTG 3.8 0.0038 P10.5 crx+ retina TAAAGCTGGT 1.9 0.0019 Adult retinal TCTGCCCTCC (2) 7.4 0.0074 Adult retinal TAAAGCTGGT 1.9 0.0019 Adult retinal TATTTTTATA (12) 1.9 0.0019 Adult retinal TCCAATTCCT (2) 1.9 0.0019 Adult retinal TGCTTTGATT (4) 1.9 0.0019 ONL TGACCACAAA 5.7 0.0057 ONL TAAGAAACAC (4) 1.9 0.0019 ONL TCCAATTCCT (2) 1.9 0.0019