Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6904	Fgfr3	fibroblast growth factor receptor 3	5	5 B (5 20.0 cM)	14184
Gene Ontology	ATP binding | extracellular space | fibroblast growth factor receptor activity | integral to membrane | kinase activity | positive regulation of cell differentiation | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | signal transduction | transferase activity
Human Homolog	FGFR3[fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TTTGCAGCAT (7) 6.5 0.0065 P8 Cb GC ACTGCTCTCT (5) 3.3 0.0033 P8 Cb GC GTTTATCAGC (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GTTTGTCAGC 11.6 0.0116 Cb medulloblastoma ACTGCTCTCT (5) 2.3 0.0023 Cb medulloblastoma GAACAGTGTG (8) 2.3 0.0023 Cb medulloblastoma TGCTAGGCCC (2) 2.3 0.0023 Cb medulloblastoma TTTGCAGCAT (7) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTGCAGCAT (7) 6.8 0.0068 P8 GC+1d culture GGCTGAGCCT (8) 3.4 0.0034 P8 GC+1d culture ACTGCTCTCT (5) 1.1 0.0011 P8 GC+1d culture GAACAGTGTG (8) 1.1 0.0011 P8 GC+1d culture GTTTATCAGC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAACAGTGTG (8) 9.4 0.0094 P8 GC+SHH+1d culture TTTGCAGCAT (7) 7 0.007 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GGCTGAGCCT (8) 3.5 0.0035 3T3 fibroblasts TGCTAGGCCC (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GTTTGTCAGC 9.9 0.0099 E15 cortex TTTGCAGCAT (7) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GTTTGTCAGC 7.2 0.0072 Hypothalamus ACTGCTCTCT (5) 5.4 0.0054 Hypothalamus TCACTTTTGA (2) 3.6 0.0036 Hypothalamus GAACAGTGTG (8) 1.8 0.0018 Hypothalamus GGCTGAGCCT (8) 1.8 0.0018 Hypothalamus TTTGCAGCAT (7) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAACAGTGTG (8) 5.6 0.0056 E12.5 retina TTTGCAGCAT (7) 3.8 0.0038 E12.5 retina GGCTGAGCCT (8) 1.9 0.0019 E12.5 retina GTTTATCAGC (2) 1.9 0.0019 E12.5 retina GTTTGTCAGC 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GGCTGAGCCT (8) 3.6 0.0036 E14.5 retina GAACAGTGTG (8) 1.8 0.0018 E14.5 retina GTTTATCAGC (2) 1.8 0.0018 E14.5 retina TTTGCAGCAT (7) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAACAGTGTG (8) 7.2 0.0072 E16.5 retina ACTGCTCTCT (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAACAGTGTG (8) 3.6 0.0036 E18.5 retina GTTTATCAGC (2) 3.6 0.0036 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAACAGTGTG (8) 3.9 0.0039 P0.5 retina TCACTTTTGA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAACAGTGTG (8) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAACAGTGTG (8) 2 0.002 P4.5 retina GGCTGAGCCT (8) 2 0.002 P4.5 retina GTTTATCAGC (2) 2 0.002 P4.5 retina TTTGCAGCAT (7) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGCTGAGCCT (8) 1.7 0.0017 P6.5 retina TTTGCAGCAT (7) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GGCTGAGCCT (8) 5.6 0.0056 P10.5 crx- retina ACTGCTCTCT (5) 1.9 0.0019 P10.5 crx- retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx- retina TTTGCAGCAT (7) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ACTGCTCTCT (5) 1.9 0.0019 P10.5 crx+ retina GAACAGTGTG (8) 1.9 0.0019 P10.5 crx+ retina GGCTGAGCCT (8) 1.9 0.0019 P10.5 crx+ retina GTTTGTCAGC 1.9 0.0019 P10.5 crx+ retina TCACTTTTGA (2) 1.9 0.0019 P10.5 crx+ retina TTTGCAGCAT (7) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGCTAGGCCC (2) 3.7 0.0037 Adult retinal TTTGCAGCAT (7) 3.7 0.0037 Adult retinal GAACAGTGTG (8) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GGCTGAGCCT (8) 3.8 0.0038 ONL GAACAGTGTG (8) 1.9 0.0019 ONL TTTGCAGCAT (7) 1.9 0.0019