Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6952	Kpna1	karyopherin (importin) alpha 1	16		16646
Gene Ontology	intracellular protein transport | nucleus | protein transport | protein transporter activity | protein-nucleus import | transport
Human Homolog	KPNA1[karyopherin alpha 1 (importin alpha 5)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTACCTACC 6.5 0.0065 P8 Cb GC AAAACCAGGA (4) 1.6 0.0016 P8 Cb GC CATATTGTAC (2) 1.6 0.0016 P8 Cb GC TCCACACCAA (3) 1.6 0.0016 Cb medulloblastoma ACTACCTACC 6.9 0.0069 Cb medulloblastoma GATGCAAAAT (2) 6.9 0.0069 Cb medulloblastoma CCCACCTCCT (6) 2.3 0.0023 P8 GC+1d culture TCCACACCAA (3) 3.4 0.0034 P8 GC+1d culture ACTACCTACC 2.3 0.0023 P8 GC+1d culture CCCACCTCCT (6) 2.3 0.0023 P8 GC+1d culture GATGCAAAAT (2) 2.3 0.0023 P8 GC+1d culture GGGCTTCCAG (4) 2.3 0.0023 P8 GC+1d culture CATATTGTAC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAACCAGGA (4) 1.2 0.0012 P8 GC+SHH+1d culture CATATTGTAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTAGTTTACT 1.2 0.0012 3T3 fibroblasts ACTACCTACC 3.5 0.0035 3T3 fibroblasts TTCCCAGCTC (4) 3.5 0.0035 E15 cortex ACTACCTACC 4.9 0.0049 E15 cortex TCACACCAGG (3) 4.9 0.0049 P1 cortex GGGCTTCCAG (4) 9.1 0.0091 P1 cortex ACTACCTACC 4.5 0.0045 P1 cortex TTAGTTTACT 4.5 0.0045 Hypothalamus TTAGTTTACT 3.6 0.0036 Hypothalamus ACTACCTACC 1.8 0.0018 Hypothalamus CATATTGTAC (2) 1.8 0.0018 Hypothalamus TCACACCAGG (3) 1.8 0.0018 E12.5 retina ACTACCTACC 5.6 0.0056 E12.5 retina TTAGTTTACT 3.8 0.0038 E12.5 retina TAGTGGAAGT 1.9 0.0019 E12.5 retina TCCACACCAA (3) 1.9 0.0019 E12.5 retina TTCCCAGCTC (4) 1.9 0.0019 E14.5 retina ACTACCTACC 1.8 0.0018 E14.5 retina CATATTGTAC (2) 1.8 0.0018 E14.5 retina GATGCAAAAT (2) 1.8 0.0018 E16.5 retina CCCACCTCCT (6) 7.2 0.0072 E16.5 retina TCCACACCAA (3) 3.6 0.0036 E16.5 retina ACTACCTACC 1.8 0.0018 E16.5 retina CATATTGTAC (2) 1.8 0.0018 E18.5 retina ACTACCTACC 1.8 0.0018 E18.5 retina CATATTGTAC (2) 1.8 0.0018 E18.5 retina GATGCAAAAT (2) 1.8 0.0018 E18.5 retina TCACACCAGG (3) 1.8 0.0018 E18.5 retina TTAGTTTACT 1.8 0.0018 P0.5 retina ACTACCTACC 3.9 0.0039 P0.5 retina CCCACCTCCT (6) 2 0.002 P0.5 retina TCACACCAGG (3) 2 0.002 P0.5 retina TCCACACCAA (3) 2 0.002 P2.5 retina GATGCAAAAT (2) 1.8 0.0018 P2.5 retina TAGTGGAAGT 1.8 0.0018 P2.5 retina TCACACCAGG (3) 1.8 0.0018 P4.5 retina TCCACACCAA (3) 4 0.004 P4.5 retina GGGCTTCCAG (4) 2 0.002 P4.5 retina TCACACCAGG (3) 2 0.002 P6.5 retina TCCACACCAA (3) 6.7 0.0067 P6.5 retina GATGCAAAAT (2) 3.3 0.0033 P6.5 retina ACTACCTACC 1.7 0.0017 P6.5 retina CATATTGTAC (2) 1.7 0.0017 P6.5 retina CCCACCTCCT (6) 1.7 0.0017 P6.5 retina GGGCTTCCAG (4) 1.7 0.0017 P6.5 retina TTAGTTTACT 1.7 0.0017 P6.5 retina TTCCCAGCTC (4) 1.7 0.0017 P10.5 crx- retina GATGCAAAAT (2) 1.9 0.0019 P10.5 crx- retina TCACACCAGG (3) 1.9 0.0019 P10.5 crx- retina TCCACACCAA (3) 1.9 0.0019 P10.5 crx- retina TTCCCAGCTC (4) 1.9 0.0019 P10.5 crx+ retina ACTACCTACC 11.5 0.0115 P10.5 crx+ retina TCACACCAGG (3) 1.9 0.0019 P10.5 crx+ retina TTCCCAGCTC (4) 1.9 0.0019 ONL AAAACCAGGA (4) 1.9 0.0019 ONL ACTACCTACC 1.9 0.0019