Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7091	Ssr2	signal sequence receptor, beta	3		66256
Gene Ontology	cotranslational membrane targeting | endoplasmic reticulum | extracellular space | integral to membrane | receptor activity | signal sequence binding
Human Homolog	SSR2[signal sequence receptor, beta (translocon-associated protein beta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC ACCTTGCCCT (2) 3.3 0.0033 P8 Cb GC GAGGCTTATA (3) 3.3 0.0033 P8 Cb GC CATTTGCTAG (4) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AAAAAGGAAA (5) 2.3 0.0023 Cb medulloblastoma ACCTTGCCCT (2) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture ACCTTGCCCT (2) 13.7 0.0137 P8 GC+1d culture CATTTGCTAG (4) 6.8 0.0068 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture ACCTTGCCCT (2) 4.7 0.0047 P8 GC+SHH+1d culture CATTTGCTAG (4) 2.3 0.0023 P8 GC+SHH+1d culture CCTTGCCCCT (5) 1.2 0.0012 3T3 fibroblasts ACCTTGCCCT (2) 35 0.035 3T3 fibroblasts GAGGCTTATA (3) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex ACCTTGCCCT (2) 9.9 0.0099 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex ACCTTGCCCT (2) 9.1 0.0091 P1 cortex GAGGCTTATA (3) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus ACCTTGCCCT (2) 3.6 0.0036 Hypothalamus CCTTGCCCCT (5) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CATTTGCTAG (4) 3.8 0.0038 E12.5 retina AAAAAGGAAA (5) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CATTTGCTAG (4) 3.6 0.0036 E14.5 retina GAGGCTTATA (3) 3.6 0.0036 E14.5 retina ACCTTGCCCT (2) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CATTTGCTAG (4) 1.8 0.0018 E16.5 retina CCTTGCCCCT (5) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CATTTGCTAG (4) 3.6 0.0036 E18.5 retina ACCTTGCCCT (2) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina ACCTTGCCCT (2) 7.9 0.0079 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CATTTGCTAG (4) 10.6 0.0106 P2.5 retina ACCTTGCCCT (2) 8.8 0.0088 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CATTTGCTAG (4) 4 0.004 P4.5 retina GAGGCTTATA (3) 4 0.004 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina ACCTTGCCCT (2) 3.3 0.0033 P6.5 retina AAAAAGGAAA (5) 1.7 0.0017 P6.5 retina CATTTGCTAG (4) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina ACCTTGCCCT (2) 3.8 0.0038 P10.5 crx+ retina CATTTGCTAG (4) 3.8 0.0038 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal ACCTTGCCCT (2) 5.6 0.0056 Adult retinal CATTTGCTAG (4) 3.7 0.0037 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL ACCTTGCCCT (2) 7.7 0.0077 ONL AAAAAGGAAA (5) 1.9 0.0019