Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.70989	Caskin1	CASK interacting protein 1	17		268932
Gene Ontology	cellular_component unknown | DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	CASKIN1[CASK interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTGACCGCTC (2) 2.3 0.0023 P8 GC+1d culture CTAACAGAAT (2) 1.1 0.0011 P8 GC+SHH+1d culture CTAACAGAAT (2) CTGACCGCTC (2) 4.6 0.0046 E15 cortex CTGACCGCTC (2) 4.9 0.0049 P1 cortex CTAACAGAAT (2) GGGGTCAGGG 9 0.009 Hypothalamus CTGACCGCTC (2) 3.6 0.0036 E16.5 retina CTGACCGCTC (2) 3.6 0.0036 E18.5 retina CTGACCGCTC (2) 3.6 0.0036 P0.5 retina CTAACAGAAT (2) CTGACCGCTC (2) GGGGTCAGGG 13.8 0.0138 P2.5 retina CTAACAGAAT (2) CTGACCGCTC (2) GGGGTCAGGG 12.4 0.0124 P4.5 retina CTAACAGAAT (2) CTGACCGCTC (2) 8 0.008 P6.5 retina CTAACAGAAT (2) CTGACCGCTC (2) 13.3 0.0133 P10.5 crx- retina CTGACCGCTC (2) GGGGTCAGGG 9.3 0.0093 P10.5 crx+ retina CTGACCGCTC (2) GGGGTCAGGG 5.7 0.0057 Adult retinal CTAACAGAAT (2) CTGACCGCTC (2) 3.8 0.0038 ONL CTAACAGAAT (2) 1.9 0.0019