Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7271	Nxf1	nuclear RNA export factor 1 homolog (S. cerevisiae)	19	19 5.0 cM	53319
Gene Ontology	intracellular | mRNA processing | mRNA-nucleus export | nuclear pore | nucleocytoplasmic transporter activity | nucleus | protein binding | protein transporter activity | protein-nucleus import | RNA binding | RNA-nucleus export | transport
Human Homolog	NXF1[nuclear RNA export factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) ATAACCGTGT (2) GCTCACAGAG GTGCCAGGAA 220.2 0.2202 Cb medulloblastoma AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 807 0.807 P8 GC+1d culture AAAAAAAAAA (2) ATAACCGTGT (2) GAATAATAGA GCTCACAGAG GTGCCAGGAA TGTGAATGGC (2) 219 0.219 P8 GC+SHH+1d culture AAAAAAAAAA (2) AGGCTCAATC ATAACCGTGT (2) GAATAATAGA GCTCACAGAG GTGCCAGGAA TGTAACAAGG TGTGAATGGC (2) 304.6 0.3046 3T3 fibroblasts AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 49 0.049 E15 cortex AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 227.6 0.2276 P1 cortex AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA TGTAACAAGG 268 0.268 Hypothalamus AAAAAAAAAA (2) ATAACCGTGT (2) GTGCCAGGAA 130.4 0.1304 E12.5 retina AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 172.7 0.1727 E14.5 retina AAAAAAAAAA (2) AGGCTCAATC GCTCACAGAG GTGCCAGGAA 112.9 0.1129 E16.5 retina AAAAAAAAAA (2) GAATAATAGA GCTCACAGAG GTGCCAGGAA 63.4 0.0634 E18.5 retina AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA TGTGAATGGC (2) 400.1 0.4001 P0.5 retina AAAAAAAAAA (2) AGGCTCAATC ATAACCGTGT (2) GCTCACAGAG GTGCCAGGAA 153.3 0.1533 P2.5 retina AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 364.3 0.3643 P4.5 retina AAAAAAAAAA (2) GAATAATAGA GCTCACAGAG GTGCCAGGAA 299.2 0.2992 P6.5 retina AAAAAAAAAA (2) GAATAATAGA GTGCCAGGAA TGTAACAAGG 281.9 0.2819 P10.5 crx- retina AAAAAAAAAA (2) ATAACCGTGT (2) GCTCACAGAG GTGCCAGGAA 79.9 0.0799 P10.5 crx+ retina AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA 117.2 0.1172 Adult retinal AAAAAAAAAA (2) GCTCACAGAG GTGCCAGGAA TGTGAATGGC (2) 83.4 0.0834 ONL AAAAAAAAAA (2) GTGCCAGGAA 116.8 0.1168