Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7281	AI413331	expressed sequence AI413331	2		98940
Mm.7281	Col5a1	procollagen, type V, alpha 1	2	2 18.0 cM	12831
Gene Ontology	cell adhesion | collagen | collagen type V | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | heparin binding | structural molecule activity
Human Homolog	COL5A1[collagen, type V, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 19 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTAGCCAC (2) 1.6 0.0016 Cb medulloblastoma GACGTACACA (3) 2.3 0.0023 P8 GC+1d culture ACCTAGCCAC (2) GAAGAGATCT (5) 2.2 0.0022 P8 GC+SHH+1d culture ACCTAGCCAC (2) GGTCCTCCAG (2) 3.5 0.0035 Hypothalamus GACGTACACA (3) 1.8 0.0018 E12.5 retina GACGTACACA (3) 3.8 0.0038 E14.5 retina GAAGAGATCT (5) 3.6 0.0036 E16.5 retina GAAGAGATCT (5) 3.6 0.0036 E18.5 retina GAAGAGATCT (5) 5.5 0.0055 P0.5 retina GAAGAGATCT (5) GGTCCTCCAG (2) 4 0.004 P2.5 retina GAAGAGATCT (5) 1.8 0.0018 P4.5 retina GAAGAGATCT (5) 4 0.004 P6.5 retina ACCTAGCCAC (2) 1.7 0.0017 P10.5 crx- retina ACCTAGCCAC (2) 3.7 0.0037 P10.5 crx+ retina ACCTAGCCAC (2) 5.8 0.0058 Adult retinal ACCTAGCCAC (2) 1.9 0.0019