Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.74208	Pphln1	periphilin 1	15		223828
Gene Ontology	nucleus
Human Homolog	PPHLN1[periphilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCAAAATA TTTGTAAGTT 4.9 0.0049 Cb medulloblastoma TTTTTTGTTT (3) 2.3 0.0023 P8 GC+1d culture AATTTTAGAT TTTGTAAGTT TTTTTTGTTT (3) 9.1 0.0091 P8 GC+SHH+1d culture TTTGTAAGTT TTTTTTGTTT (3) 3.5 0.0035 E15 cortex TTTTTTGTTT (3) 4.9 0.0049 P1 cortex TTTGTAAGTT TTTTTTGTTT (3) 9 0.009 Hypothalamus AATTTTAGAT 1.8 0.0018 E12.5 retina TCGTCAATTA TTTTTTGTTT (3) 7.6 0.0076 E14.5 retina GACCAAAATA TTTGTAAGTT 3.6 0.0036 E16.5 retina TTTGTAAGTT TTTTTTGTTT (3) 3.6 0.0036 P2.5 retina TTTGTAAGTT 7 0.007 P4.5 retina TTTGTAAGTT TTTTTTGTTT (3) 4 0.004 P6.5 retina TTTGTAAGTT 3.3 0.0033 P10.5 crx- retina TTTGTAAGTT 3.7 0.0037 P10.5 crx+ retina TTTGTAAGTT TTTTTTGTTT (3) 3.8 0.0038 Adult retinal GACCAAAATA 1.9 0.0019 ONL TCGTCAATTA TTTGTAAGTT 3.8 0.0038