Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.74492
4933428G20Rik
RIKEN cDNA 4933428G20 gene
11
58996
Mm.74492
A330041B18Rik
RIKEN cDNA A330041B18 gene
11
104707
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
GCTCCTCCCA
(
7
)
1.6
0.0016
P8 Cb GC
GGGGCAGGGG
(
7
)
1.6
0.0016
P8 Cb GC
TGCCAGGCAG (
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
GCTCCTCCCA
(
7
)
9.2
0.0092
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
GCTCCTCCCA
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GCTCCTCCCA
(
7
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GCTCCTCCCA
(
7
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
GCTCCTCCCA
(
7
)
1.8
0.0018
E14.5 retina
TGCCAGGCAG (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
GCTCCTCCCA
(
7
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
GCTCCTCCCA
(
7
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
GCTCCTCCCA
(
7
)
2
0.002
P4.5 retina
TGCCAGGCAG (
5
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
GCTCCTCCCA
(
7
)
1.7
0.0017
P6.5 retina
GGGGCAGGGG
(
7
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GCTCCTCCCA
(
7
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
GCTCCTCCCA
(
7
)
3.8
0.0038
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
GGGGCAGGGG
(
7
)
1.9
0.0019
