Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.74689
4930481F22Rik
RIKEN cDNA 4930481F22 gene
8
74997
Mm.74689
5033413H12Rik
RIKEN cDNA 5033413H12 gene
8
270096
Human Homolog
HSRG1[HSV-1 stimulation-related gene 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGATGCCGA
(
3
)
TTATTTTTTT
(
3
)
3.2
0.0032
Cb medulloblastoma
AGCTATTTCC
TTATTTTTTT
(
3
)
6.9
0.0069
P8 GC+1d culture
AGCTATTTCC
GAGATGCCGA
(
3
)
TTATTTTTTT
(
3
)
7.9
0.0079
P8 GC+SHH+1d culture
AGCTATTTCC
CGTGTACTCA
(
2
)
GAGATGCCGA
(
3
)
TTATTTTTTT
(
3
)
8.2
0.0082
E15 cortex
GAGATGCCGA
(
3
)
TTATTTTTTT
(
3
)
9.8
0.0098
Hypothalamus
CGTGTACTCA
(
2
)
1.8
0.0018
E12.5 retina
CGTGTACTCA
(
2
)
GAGATGCCGA
(
3
)
3.8
0.0038
E14.5 retina
GAGATGCCGA
(
3
)
TGTTGAATGT
5.4
0.0054
E16.5 retina
GAGATGCCGA
(
3
)
TTATTTTTTT
(
3
)
3.6
0.0036
E18.5 retina
GAGATGCCGA
(
3
)
1.8
0.0018
P0.5 retina
CGTGTACTCA
(
2
)
TGTTGAATGT
4
0.004
P2.5 retina
GAGATGCCGA
(
3
)
1.8
0.0018
P4.5 retina
GAGATGCCGA
(
3
)
TGTTGAATGT
9.9
0.0099
P6.5 retina
AGCTATTTCC
GAGATGCCGA
(
3
)
3.4
0.0034
P10.5 crx- retina
GAGATGCCGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGCTATTTCC
GAGATGCCGA
(
3
)
3.8
0.0038
Adult retinal
GAGATGCCGA
(
3
)
TGTTGAATGT
7.5
0.0075
ONL
GAGATGCCGA
(
3
)
TGTTGAATGT
3.8
0.0038
