Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.76649	Vcam1	vascular cell adhesion molecule 1	3	3 50.8 cM	22329
Gene Ontology	cell adhesion | cell-cell adhesion | extracellular space | integral to membrane | membrane | plasma membrane | protein binding
Human Homolog	VCAM1[vascular cell adhesion molecule 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACTGTACG 1.6 0.0016 Cb medulloblastoma GTACTGTACG TCTACAAAAA (3) 4.6 0.0046 P8 GC+1d culture AAATCATTGT CATACATTGG GTACTGTACG 4.5 0.0045 P8 GC+SHH+1d culture CATACATTGG GTACTGTACG 3.5 0.0035 Hypothalamus AAAGGATCGT (2) GTACTGTACG TCTACAAAAA (3) 5.4 0.0054 E16.5 retina TCTACAAAAA (3) 1.8 0.0018 E18.5 retina TGAGACTGGA 1.8 0.0018 P2.5 retina AAAGGATCGT (2) GATTTTAAGT TCTACAAAAA (3) 5.4 0.0054 P4.5 retina GATTTTAAGT TGAGACTGGA 6 0.006 P6.5 retina GATTTTAAGT 1.7 0.0017 P10.5 crx- retina CATACATTGG GATTTTAAGT GTACTGTACG 5.7 0.0057 P10.5 crx+ retina AAATCATTGT GTACTGTACG 5.7 0.0057 Adult retinal AAAGGATCGT (2) TCTACAAAAA (3) 3.8 0.0038 ONL AAAGGATCGT (2) GATTTTAAGT 3.8 0.0038