Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7723	Pabpn1	poly(A) binding protein, nuclear 1	14	14 19.5 cM	54196
Gene Ontology	mRNA polyadenylation | mRNA processing | nucleic acid binding | nucleus | poly(A) binding | RNA binding
Human Homolog	PABPN1[poly(A) binding protein, nuclear 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTCGCTCT GTATTCCCCT 31 0.031 Cb medulloblastoma ATGTCGCTCT GTATTCCCCT 11.5 0.0115 P8 GC+1d culture GACACATCTC GTATTCCCCT 9.1 0.0091 P8 GC+SHH+1d culture ATGTCGCTCT GTATTCCCCT 8.2 0.0082 3T3 fibroblasts GGGAGGGTCT GTATTCCCCT 10.5 0.0105 E15 cortex ATGTCGCTCT GTATTCCCCT 14.8 0.0148 P1 cortex GTATTCCCCT 50 0.05 Hypothalamus ATGTCGCTCT GACACATCTC GTATTCCCCT 29 0.029 E12.5 retina GACACATCTC GTATTCCCCT 28.2 0.0282 E14.5 retina ATGTCGCTCT GGCCCGCAAC GGGAGGGTCT GTATTCCCCT 43.7 0.0437 E16.5 retina ATGTCGCTCT GGCCCGCAAC GTATTCCCCT 63.4 0.0634 E18.5 retina ATGTCGCTCT GTATTCCCCT 41.8 0.0418 P0.5 retina ATGTCGCTCT GTATTCCCCT 21.6 0.0216 P2.5 retina ATGTCGCTCT GACACATCTC GTATTCCCCT 35.2 0.0352 P4.5 retina ATGTCGCTCT GACACATCTC GTATTCCCCT 41.6 0.0416 P6.5 retina ATGTCGCTCT GACACATCTC GGGAGGGTCT GTATTCCCCT 31.8 0.0318 P10.5 crx- retina ATGTCGCTCT GTATTCCCCT 18.6 0.0186 P10.5 crx+ retina GACACATCTC GGCCCGCAAC GTATTCCCCT 28.8 0.0288 Adult retinal ATGTCGCTCT GACACATCTC GTATTCCCCT 16.7 0.0167 ONL GACACATCTC GTATTCCCCT 19.1 0.0191