Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7726	C130081A10Rik	RIKEN cDNA C130081A10 gene	9		97550
Mm.7726	Ppp2r1b	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	9		73699
Human Homolog	PPP2R1B[protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAAGAAAAAA (15) 11.4 0.0114 P8 Cb GC TTCATAAAAA (4) 9.8 0.0098 P8 Cb GC TTACATAAAA (5) 3.3 0.0033 P8 Cb GC AAAATATTTA (6) 1.6 0.0016 P8 Cb GC GGATCCAGTG (3) 1.6 0.0016 P8 Cb GC TGGCTGGCTG (8) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAGAAAAAA (15) 13.9 0.0139 Cb medulloblastoma AAAATATTTA (6) 2.3 0.0023 Cb medulloblastoma TGGCTGGCTG (8) 2.3 0.0023 Cb medulloblastoma TTACATAAAA (5) 2.3 0.0023 Cb medulloblastoma TTCATAAAAA (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTCATAAAAA (4) 11.4 0.0114 P8 GC+1d culture AAAGAAAAAA (15) 8 0.008 P8 GC+1d culture TTACATAAAA (5) 4.6 0.0046 P8 GC+1d culture TATTATAGCA (2) 3.4 0.0034 P8 GC+1d culture TGGCTGGCTG (8) 3.4 0.0034 P8 GC+1d culture AAAGAGAAAA (11) 2.3 0.0023 P8 GC+1d culture AGGGTGCTGG (5) 2.3 0.0023 P8 GC+1d culture AAAATATTTA (6) 1.1 0.0011 P8 GC+1d culture GAAGCTTCAA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAGAAAAAA (15) 12.9 0.0129 P8 GC+SHH+1d culture TTCATAAAAA (4) 7 0.007 P8 GC+SHH+1d culture TATTATAGCA (2) 4.7 0.0047 P8 GC+SHH+1d culture TTACATAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture AGGGTGCTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture AAAATATTTA (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AGGGTGCTGG (5) 3.5 0.0035 3T3 fibroblasts TGGCTGGCTG (8) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AAAGAAAAAA (15) 4.9 0.0049 E15 cortex AGGGTGCTGG (5) 4.9 0.0049 E15 cortex TGGCTGGCTG (8) 4.9 0.0049 E15 cortex TTCATAAAAA (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAGAAAAAA (15) 9.1 0.0091 P1 cortex CACACACAGA (5) 9.1 0.0091 P1 cortex TTCATAAAAA (4) 9.1 0.0091 P1 cortex AGGGTGCTGG (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AAAGAAAAAA (15) 9.1 0.0091 Hypothalamus AGGGTGCTGG (5) 3.6 0.0036 Hypothalamus TTCATAAAAA (4) 3.6 0.0036 Hypothalamus GGAAGTCTCC (4) 1.8 0.0018 Hypothalamus TATTATAGCA (2) 1.8 0.0018 Hypothalamus TGGCTGGCTG (8) 1.8 0.0018 Hypothalamus TTACATAAAA (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AAAATATTTA (6) 3.8 0.0038 E12.5 retina AGGGTGCTGG (5) 3.8 0.0038 E12.5 retina GGATCCAGTG (3) 3.8 0.0038 E12.5 retina TATTATAGCA (2) 3.8 0.0038 E12.5 retina TTACATAAAA (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTACATAAAA (5) 9.1 0.0091 E14.5 retina TGGCTGGCTG (8) 3.6 0.0036 E14.5 retina AAAATATTTA (6) 1.8 0.0018 E14.5 retina CACACACAGA (5) 1.8 0.0018 E14.5 retina CTTAAAAGTG (7) 1.8 0.0018 E14.5 retina TTCATAAAAA (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AAAGAAAAAA (15) 3.6 0.0036 E16.5 retina AAAATATTTA (6) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina TTACATAAAA (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AAAGAAAAAA (15) 10.9 0.0109 E18.5 retina TATTATAGCA (2) 7.3 0.0073 E18.5 retina AAAATATTTA (6) 1.8 0.0018 E18.5 retina AAACTTTCAA (12) 1.8 0.0018 E18.5 retina AAAGAGAAAA (11) 1.8 0.0018 E18.5 retina CTTAAAAGTG (7) 1.8 0.0018 E18.5 retina GGATCCAGTG (3) 1.8 0.0018 E18.5 retina GTATGATGCA (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AAAGAAAAAA (15) 7.9 0.0079 P0.5 retina TGGCTGGCTG (8) 7.9 0.0079 P0.5 retina AGGGTGCTGG (5) 5.9 0.0059 P0.5 retina TTACATAAAA (5) 5.9 0.0059 P0.5 retina AAAATATTTA (6) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAGAAAAAA (15) 8.8 0.0088 P2.5 retina AAAATATTTA (6) 3.5 0.0035 P2.5 retina TTACATAAAA (5) 3.5 0.0035 P2.5 retina AGGGTGCTGG (5) 1.8 0.0018 P2.5 retina TATTATAGCA (2) 1.8 0.0018 P2.5 retina TGGCTGGCTG (8) 1.8 0.0018 P2.5 retina TTCATAAAAA (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAGAAAAAA (15) 5.9 0.0059 P4.5 retina AAAATATTTA (6) 2 0.002 P4.5 retina CTTAAAAGTG (7) 2 0.002 P4.5 retina GAAGCTTCAA (3) 2 0.002 P4.5 retina GGAAGTCTCC (4) 2 0.002 P4.5 retina GTATGATGCA (5) 2 0.002 P4.5 retina TATTATAGCA (2) 2 0.002 P4.5 retina TTACATAAAA (5) 2 0.002 P4.5 retina TTCATAAAAA (4) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AAAGAAAAAA (15) 10 0.01 P6.5 retina TTCATAAAAA (4) 8.3 0.0083 P6.5 retina AAACTTTCAA (12) 3.3 0.0033 P6.5 retina TATTATAGCA (2) 3.3 0.0033 P6.5 retina TGGCTGGCTG (8) 3.3 0.0033 P6.5 retina AAAATATTTA (6) 1.7 0.0017 P6.5 retina CACACACAGA (5) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TATTATAGCA (2) 7.4 0.0074 P10.5 crx- retina GAAGCTTCAA (3) 1.9 0.0019 P10.5 crx- retina TTACATAAAA (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TTCATAAAAA (4) 7.7 0.0077 P10.5 crx+ retina TGGCTGGCTG (8) 5.8 0.0058 P10.5 crx+ retina AAAGAGAAAA (11) 1.9 0.0019 P10.5 crx+ retina CTTAAAAGTG (7) 1.9 0.0019 P10.5 crx+ retina GAAGCTTCAA (3) 1.9 0.0019 P10.5 crx+ retina TTACATAAAA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AAAGAGAAAA (11) 3.7 0.0037 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal AAAATATTTA (6) 1.9 0.0019 Adult retinal CACACACAGA (5) 1.9 0.0019 Adult retinal GTATGATGCA (5) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AAAGAAAAAA (15) 5.7 0.0057 ONL CACACACAGA (5) 3.8 0.0038 ONL GGAAGTCTCC (4) 1.9 0.0019 ONL TATTATAGCA (2) 1.9 0.0019