Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.78250	C330006K01Rik	RIKEN cDNA C330006K01 gene	5		231855
Human Homolog	FOXK1[forkhead box K1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGAGAGAG (8) 6.5 0.0065 P8 Cb GC ACTGTCAGGA (2) 1.6 0.0016 Cb medulloblastoma AGAGAGAGAG (8) 25.4 0.0254 Cb medulloblastoma CCTTGGTCAC (2) 2.3 0.0023 P8 GC+1d culture AGAGAGAGAG (8) 3.4 0.0034 P8 GC+1d culture GGGGAAACCG (2) 3.4 0.0034 P8 GC+1d culture CCTTGGTCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture AGAGAGAGAG (8) 2.3 0.0023 P8 GC+SHH+1d culture GGAAAGCGGC (4) 1.2 0.0012 3T3 fibroblasts ACTGTCAGGA (2) 3.5 0.0035 E15 cortex AGAGAGAGAG (8) 9.9 0.0099 E15 cortex ACTGTCAGGA (2) 4.9 0.0049 E15 cortex GGAAAGCGGC (4) 4.9 0.0049 P1 cortex AGAGAGAGAG (8) 4.5 0.0045 P1 cortex GGGGAAACCG (2) 4.5 0.0045 Hypothalamus AGAGAGAGAG (8) 14.5 0.0145 E12.5 retina ACTGTCAGGA (2) 1.9 0.0019 E12.5 retina CCTTGGTCAC (2) 1.9 0.0019 E12.5 retina GGAAAGCGGC (4) 1.9 0.0019 E14.5 retina GGAAAGCGGC (4) 3.6 0.0036 E14.5 retina AGAGAGAGAG (8) 1.8 0.0018 E14.5 retina CCTTGGTCAC (2) 1.8 0.0018 E16.5 retina AGAGAGAGAG (8) 3.6 0.0036 E16.5 retina ACTGTCAGGA (2) 1.8 0.0018 E16.5 retina GGAAAGCGGC (4) 1.8 0.0018 E18.5 retina AGAGAGAGAG (8) 3.6 0.0036 P0.5 retina AGAGAGAGAG (8) 5.9 0.0059 P0.5 retina CCTTGGTCAC (2) 2 0.002 P0.5 retina GGAAAGCGGC (4) 2 0.002 P0.5 retina GGGGAAACCG (2) 2 0.002 P2.5 retina AGAGAGAGAG (8) 1.8 0.0018 P2.5 retina GGAAAGCGGC (4) 1.8 0.0018 P4.5 retina AGAGAGAGAG (8) 7.9 0.0079 P4.5 retina CCTTGGTCAC (2) 2 0.002 P6.5 retina AGAGAGAGAG (8) 5 0.005 P10.5 crx- retina AGAGAGAGAG (8) 9.3 0.0093 P10.5 crx- retina GGAAAGCGGC (4) 1.9 0.0019 P10.5 crx+ retina AGAGAGAGAG (8) 5.8 0.0058 Adult retinal AGAGAGAGAG (8) 9.3 0.0093 ONL AGAGAGAGAG (8) 7.7 0.0077