Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.790	Tparl	TPA regulated locus	5	5 42.0 cM	21982
Gene Ontology	extracellular space | integral to membrane | membrane | molecular_function unknown
Human Homolog	TPARL[TPA regulated locus]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTTACCAA 11.4 0.0114 P8 Cb GC CTACAAGAAA (3) 1.6 0.0016 P8 Cb GC CTGGCCTTGG (4) 1.6 0.0016 P8 Cb GC GCCCTGGCAG (10) 1.6 0.0016 Cb medulloblastoma GCCCTGGCAG (10) 2.3 0.0023 P8 GC+1d culture GACTTACCAA 3.4 0.0034 P8 GC+1d culture GCCCTGGCAG (10) 3.4 0.0034 P8 GC+1d culture CTGGCCTTGG (4) 1.1 0.0011 P8 GC+SHH+1d culture GACTTACCAA 10.5 0.0105 P8 GC+SHH+1d culture GCCCTGGCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture CACAGCTTTA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTTGGGGCAG (3) 1.2 0.0012 E15 cortex GCCCTGGCAG (10) 9.9 0.0099 P1 cortex CTACAAGAAA (3) 4.5 0.0045 Hypothalamus CTACAAGAAA (3) 1.8 0.0018 Hypothalamus GCCCTGGCAG (10) 1.8 0.0018 Hypothalamus TTTGGGGCAG (3) 1.8 0.0018 E12.5 retina GACTTACCAA 7.5 0.0075 E14.5 retina GACTTACCAA 5.5 0.0055 E14.5 retina CTACAAGAAA (3) 1.8 0.0018 E14.5 retina TTTGGGGCAG (3) 1.8 0.0018 E16.5 retina GACTTACCAA 10.9 0.0109 E18.5 retina GACTTACCAA 5.5 0.0055 E18.5 retina CACAGCTTTA (6) 1.8 0.0018 E18.5 retina GCCCTGGCAG (10) 1.8 0.0018 P0.5 retina GACTTACCAA 7.9 0.0079 P0.5 retina CACAGCTTTA (6) 2 0.002 P2.5 retina GACTTACCAA 12.3 0.0123 P2.5 retina GCCCTGGCAG (10) 3.5 0.0035 P4.5 retina GACTTACCAA 7.9 0.0079 P10.5 crx- retina GACTTACCAA 11.1 0.0111 P10.5 crx- retina CACAGCTTTA (6) 1.9 0.0019 P10.5 crx- retina TGATTCAGGT (4) 1.9 0.0019 P10.5 crx+ retina GCCCTGGCAG (10) 3.8 0.0038 P10.5 crx+ retina CTACAAGAAA (3) 1.9 0.0019 P10.5 crx+ retina GACTTACCAA 1.9 0.0019 P10.5 crx+ retina TGATTCAGGT (4) 1.9 0.0019 Adult retinal CTGGCCTTGG (4) 3.7 0.0037 Adult retinal GACTTACCAA 1.9 0.0019 Adult retinal GCCCTGGCAG (10) 1.9 0.0019 Adult retinal TGATTCAGGT (4) 1.9 0.0019 ONL GACTTACCAA 5.7 0.0057