Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8	Usf1	upstream transcription factor 1	1	1 93.3 cM	22278
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	USF1[upstream transcription factor 1] | USF1[upstream transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCTGCAT (29) 8.2 0.0082 Cb medulloblastoma GCCTCTGCAT (29) 6.9 0.0069 P8 GC+1d culture GCCTCTGCAT (29) 20.5 0.0205 P8 GC+SHH+1d culture GCCTCTGCAT (29) 9.4 0.0094 3T3 fibroblasts GCCTCTGCAT (29) 7 0.007 E15 cortex GCCTCTGCAT (29) 39.6 0.0396 E15 cortex TGCTGTCTCC (8) 9.9 0.0099 E15 cortex AGCAGCGAGG (9) 4.9 0.0049 P1 cortex GCCTCTGCAT (29) 18.2 0.0182 Hypothalamus GCCTCTGCAT (29) 10.9 0.0109 Hypothalamus TGCTGTCTCC (8) 5.4 0.0054 E12.5 retina GCCTCTGCAT (29) 11.3 0.0113 E14.5 retina GCCTCTGCAT (29) 14.6 0.0146 E14.5 retina AGCAGCGAGG (9) 5.5 0.0055 E14.5 retina GGGCCCCCCT (7) 1.8 0.0018 E16.5 retina GCCTCTGCAT (29) 16.3 0.0163 E16.5 retina AGCAGCGAGG (9) 3.6 0.0036 E18.5 retina GCCTCTGCAT (29) 9.1 0.0091 E18.5 retina TGCTGTCTCC (8) 1.8 0.0018 P0.5 retina GCCTCTGCAT (29) 23.6 0.0236 P0.5 retina TGCTGTCTCC (8) 2 0.002 P2.5 retina GCCTCTGCAT (29) 31.7 0.0317 P2.5 retina TGCTGTCTCC (8) 5.3 0.0053 P2.5 retina AGCAGCGAGG (9) 3.5 0.0035 P4.5 retina GCCTCTGCAT (29) 19.8 0.0198 P6.5 retina GCCTCTGCAT (29) 21.7 0.0217 P6.5 retina AGCAGCGAGG (9) 1.7 0.0017 P10.5 crx- retina GCCTCTGCAT (29) 27.9 0.0279 P10.5 crx- retina AGCAGCGAGG (9) 5.6 0.0056 P10.5 crx+ retina GCCTCTGCAT (29) 32.7 0.0327 P10.5 crx+ retina GGGCCCCCCT (7) 1.9 0.0019 P10.5 crx+ retina TGCTGTCTCC (8) 1.9 0.0019 Adult retinal GCCTCTGCAT (29) 33.3 0.0333 ONL GCCTCTGCAT (29) 17.2 0.0172 ONL GGGCCCCCCT (7) 1.9 0.0019