Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8004	Gabrb3	gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3	7	7 C (7 28.6 cM)	14402
Gene Ontology	chloride transport | extracellular ligand-gated ion channel activity | GABA-A receptor activity | gamma-aminobutyric acid signaling pathway | integral to membrane | integral to plasma membrane | ion channel activity | ion transport | membrane | neurotransmitter receptor activity | postsynaptic membrane | receptor activity | synaptic transmission | transport
Human Homolog	GABRB3[gamma-aminobutyric acid (GABA) A receptor, beta 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

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SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC ACAGTTAAGC (3) 1.6 0.0016 P8 Cb GC GGAGACAGAA (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma ACAGTTAAGC (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ACAGTTAAGC (3) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture GATTATACCT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture TATTCTGTAA (4) 2.3 0.0023 P8 GC+SHH+1d culture ACAGTTAAGC (3) 1.2 0.0012 P8 GC+SHH+1d culture ATGGACCTCA (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts ACAGTTAAGC (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ACAGTTAAGC (3) 14.8 0.0148 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex ACAGTTAAGC (3) 9.1 0.0091 P1 cortex ATGGACCTCA (2) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GACTGACCCT (2) 7.2 0.0072 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus ATGGACCTCA (2) 1.8 0.0018 Hypothalamus TATTCTGTAA (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ACAGTTAAGC (3) 18.8 0.0188 E12.5 retina GACTGACCCT (2) 5.6 0.0056 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GACTGACCCT (2) 72.9 0.0729 E14.5 retina ACAGTTAAGC (3) 7.3 0.0073 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ACAGTTAAGC (3) 7.2 0.0072 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina ATGGACCTCA (2) 1.8 0.0018 E16.5 retina TATTCTGTAA (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GACTGACCCT (2) 27.3 0.0273 E18.5 retina ACAGTTAAGC (3) 7.3 0.0073 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina GACTGACACT (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina ACAGTTAAGC (3) 3.9 0.0039 P0.5 retina GGAGACAGAA (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina ACAGTTAAGC (3) 1.8 0.0018 P2.5 retina ATGGACCTCA (2) 1.8 0.0018 P2.5 retina GGAGACAGAA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ACAGTTAAGC (3) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ACAGTTAAGC (3) 6.7 0.0067 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina GACTGACCCT (2) 1.7 0.0017 P6.5 retina GGAGACAGAA (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ACAGTTAAGC (3) 3.7 0.0037 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina ATGGACCTCA (2) 1.9 0.0019 P10.5 crx- retina GACTGACACT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ACAGTTAAGC (3) 1.9 0.0019 P10.5 crx+ retina GATTATACCT (2) 1.9 0.0019 P10.5 crx+ retina GGAGACAGAA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ACAGTTAAGC (3) 3.7 0.0037 ONL GACTGACCCT (2) 176.2 0.1762 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GACTGACACT (2) 1.9 0.0019 ONL GGAGACAGAA (3) 1.9 0.0019