Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.806	Cd81	CD 81 antigen	7	7 69.3 cM	12520
Gene Ontology	integral to membrane | plasma membrane
Human Homolog	CD81[CD81 antigen (target of antiproliferative antibody 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 175 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TGTGATGTCA (3) 17.9 0.0179 P8 Cb GC CTAAAAAAAA (20) 11.4 0.0114 P8 Cb GC CCCACCCACT (6) 8.2 0.0082 P8 Cb GC GCCTGTGTAT (3) 8.2 0.0082 P8 Cb GC CACCACGACC 4.9 0.0049 P8 Cb GC GCTGTGTATT (4) 4.9 0.0049 P8 Cb GC ATAACACATA 3.3 0.0033 P8 Cb GC GCCTGCTGGG (5) 3.3 0.0033 P8 Cb GC CCCACCAGCA (9) 1.6 0.0016 P8 Cb GC TCTTCCACTT (2) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma CTAAAAAAAA (20) 39.3 0.0393 Cb medulloblastoma TGTGATGTCA (3) 27.7 0.0277 Cb medulloblastoma CCCACCCACT (6) 11.6 0.0116 Cb medulloblastoma GCCTGTGTAT (3) 9.2 0.0092 Cb medulloblastoma CACCACGACC 6.9 0.0069 Cb medulloblastoma ATAACACATA 4.6 0.0046 Cb medulloblastoma CAAAAGGAAA (8) 2.3 0.0023 Cb medulloblastoma CCCACCAGCA (9) 2.3 0.0023 Cb medulloblastoma GGGGTGGAGG (9) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CTAAAAAAAA (20) 19.4 0.0194 P8 GC+1d culture CACCACGACC 4.6 0.0046 P8 GC+1d culture CCCACCCACT (6) 4.6 0.0046 P8 GC+1d culture GCCTGTGTAT (3) 3.4 0.0034 P8 GC+1d culture TGTGATGTCA (3) 3.4 0.0034 P8 GC+1d culture GCTGTGTATT (4) 2.3 0.0023 P8 GC+1d culture ATACACAGAC 1.1 0.0011 P8 GC+1d culture GCCCTCTAGC (2) 1.1 0.0011 P8 GC+1d culture TCTTCCACTT (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CTAAAAAAAA (20) 41 0.041 P8 GC+SHH+1d culture TGTGATGTCA (3) 17.6 0.0176 P8 GC+SHH+1d culture CCCACCCACT (6) 9.4 0.0094 P8 GC+SHH+1d culture CACCACGACC 8.2 0.0082 P8 GC+SHH+1d culture GCTGTGTATT (4) 7 0.007 P8 GC+SHH+1d culture CCACCCACTC (5) 2.3 0.0023 P8 GC+SHH+1d culture ATAACACATA 1.2 0.0012 P8 GC+SHH+1d culture CAAAAGGAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGCTGGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGTGTAT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGAGCCGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTGGAGG (9) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCCACTT (2) 1.2 0.0012 3T3 fibroblasts CACCACGACC 38.6 0.0386 3T3 fibroblasts CCCACCCACT (6) 17.5 0.0175 3T3 fibroblasts GCTGTGTATT (4) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CCCACCCACT (6) 14.8 0.0148 E15 cortex CTAAAAAAAA (20) 14.8 0.0148 E15 cortex GGGGAGCCGG (3) 9.9 0.0099 E15 cortex CACCACGACC 4.9 0.0049 E15 cortex GCTGTGTATT (4) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex ATAACACATA 13.6 0.0136 P1 cortex CCCACCCACT (6) 4.5 0.0045 P1 cortex CTAAAAAAAA (20) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus CTAAAAAAAA (20) 16.3 0.0163 Hypothalamus CCCACCCACT (6) 14.5 0.0145 Hypothalamus GCCTGTGTAT (3) 14.5 0.0145 Hypothalamus TGTGATGTCA (3) 7.2 0.0072 Hypothalamus CACCACGACC 3.6 0.0036 Hypothalamus GTGCTGTGCT 3.6 0.0036 Hypothalamus GATGCCGCTG (4) 1.8 0.0018 Hypothalamus TCTTCCACTT (2) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CTAAAAAAAA (20) 11.3 0.0113 E12.5 retina CACCACGACC 7.5 0.0075 E12.5 retina GCCTGTGTAT (3) 7.5 0.0075 E12.5 retina GCTGTGTATT (4) 3.8 0.0038 E12.5 retina ATAACACATA 1.9 0.0019 E12.5 retina CCACCCACTC (5) 1.9 0.0019 E12.5 retina CCCACCCACT (6) 1.9 0.0019 E12.5 retina GATGCCGCTG (4) 1.9 0.0019 E12.5 retina TGTGATGTCA (3) 1.9 0.0019 E14.5 retina CTAAAAAAAA (20) 12.8 0.0128 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina GCTGTGTATT (4) 9.1 0.0091 E14.5 retina TGTGATGTCA (3) 9.1 0.0091 E14.5 retina CACCACGACC 3.6 0.0036 E14.5 retina CCCACCCACT (6) 3.6 0.0036 E14.5 retina CCACCCACTC (5) 1.8 0.0018 E14.5 retina GCCCTCTAGC (2) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CCCACCCACT (6) 7.2 0.0072 E16.5 retina CACCACGACC 5.4 0.0054 E16.5 retina CTAAAAAAAA (20) 5.4 0.0054 E16.5 retina GCTGTGTATT (4) 5.4 0.0054 E16.5 retina TCTTCCACTT (2) 3.6 0.0036 E16.5 retina ATAACACATA 1.8 0.0018 E16.5 retina CCACCCACTC (5) 1.8 0.0018 E16.5 retina CCCACCAGCA (9) 1.8 0.0018 E16.5 retina GATGCCGCTG (4) 1.8 0.0018 E16.5 retina GTGCTGTGCT 1.8 0.0018 E16.5 retina TGTGATGTCA (3) 1.8 0.0018 E18.5 retina ATAACACATA 45.5 0.0455 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CTAAAAAAAA (20) 20 0.02 E18.5 retina CACCACGACC 7.3 0.0073 E18.5 retina GCTGTGTATT (4) 7.3 0.0073 E18.5 retina TGTGATGTCA (3) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina CCCACCCACT (6) 9.8 0.0098 P0.5 retina CTAAAAAAAA (20) 5.9 0.0059 P0.5 retina TGTGATGTCA (3) 5.9 0.0059 P0.5 retina CACCACGACC 2 0.002 P0.5 retina CCACCCACTC (5) 2 0.002 P0.5 retina GCTGTGTATT (4) 2 0.002 P0.5 retina TCTTCCACTT (2) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CTAAAAAAAA (20) 15.8 0.0158 P2.5 retina CCCACCCACT (6) 8.8 0.0088 P2.5 retina GCCTGTGTAT (3) 8.8 0.0088 P2.5 retina CACCACGACC 7 0.007 P2.5 retina GCTGTGTATT (4) 7 0.007 P2.5 retina TGTGATGTCA (3) 7 0.007 P2.5 retina ATAACACATA 3.5 0.0035 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CTAAAAAAAA (20) 29.7 0.0297 P4.5 retina TGTGATGTCA (3) 19.8 0.0198 P4.5 retina ATAACACATA 2 0.002 P4.5 retina ATACACAGAC 2 0.002 P4.5 retina CAAAAGGAAA (8) 2 0.002 P4.5 retina CACCACGACC 2 0.002 P4.5 retina CCCACCCACT (6) 2 0.002 P4.5 retina GCTGTGTATT (4) 2 0.002 P4.5 retina GGGGAGCCGG (3) 2 0.002 P4.5 retina TTGGAAAAGG 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CTAAAAAAAA (20) 13.3 0.0133 P6.5 retina TGTGATGTCA (3) 11.7 0.0117 P6.5 retina CCCACCCACT (6) 10 0.01 P6.5 retina CACCACGACC 3.3 0.0033 P6.5 retina ATAACACATA 1.7 0.0017 P6.5 retina CAAAAGGAAA (8) 1.7 0.0017 P6.5 retina GATACCACAT (3) 1.7 0.0017 P6.5 retina GGGGTGGAGG (9) 1.7 0.0017 P10.5 crx- retina CCCACCCACT (6) 24.2 0.0242 P10.5 crx- retina TGTGATGTCA (3) 22.3 0.0223 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CACCACGACC 5.6 0.0056 P10.5 crx- retina CTAAAAAAAA (20) 5.6 0.0056 P10.5 crx- retina GCCTGTGTAT (3) 3.7 0.0037 P10.5 crx- retina GATACCACAT (3) 1.9 0.0019 P10.5 crx- retina GATGCCGCTG (4) 1.9 0.0019 P10.5 crx- retina GCCCTCTAGC (2) 1.9 0.0019 P10.5 crx- retina TCTTCCACTT (2) 1.9 0.0019 P10.5 crx- retina TTGGAAAAGG 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CCCACCCACT (6) 11.5 0.0115 P10.5 crx+ retina CACCACGACC 9.6 0.0096 P10.5 crx+ retina CTAAAAAAAA (20) 7.7 0.0077 P10.5 crx+ retina GCCTGTGTAT (3) 7.7 0.0077 P10.5 crx+ retina TGTGATGTCA (3) 7.7 0.0077 P10.5 crx+ retina CCACCCACTC (5) 3.8 0.0038 P10.5 crx+ retina GCCCTCTAGC (2) 3.8 0.0038 P10.5 crx+ retina ATAACACATA 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CCCACCCACT (6) 13 0.013 Adult retinal CACCACGACC 7.4 0.0074 Adult retinal CTAAAAAAAA (20) 5.6 0.0056 Adult retinal TGTGATGTCA (3) 3.7 0.0037 Adult retinal ATAACACATA 1.9 0.0019 Adult retinal GATACCACAT (3) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL TGTGATGTCA (3) 7.7 0.0077 ONL CCCACCCACT (6) 5.7 0.0057 ONL GCCTGTGTAT (3) 5.7 0.0057 ONL ATACACAGAC 3.8 0.0038 ONL CACCACGACC 1.9 0.0019 ONL CTAAAAAAAA (20) 1.9 0.0019 ONL GGGGTGGAGG (9) 1.9 0.0019 ONL TTGGAAAAGG 1.9 0.0019