Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.826	Rhoq	ras homolog gene family, member Q	17	17 56.0 cM	104215
Gene Ontology	actin cytoskeleton organization and biogenesis | GTP binding | GTPase activity | GTPase activity | plasma membrane | protein binding | regulation of cell shape | small GTPase mediated signal transduction
Human Homolog	LOC284988[similar to ARHQ protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACACCAGAG (7) 9.8 0.0098 P8 Cb GC TTAATAAAAT (12) 8.2 0.0082 Cb medulloblastoma GACACCAGAG (7) 48.6 0.0486 Cb medulloblastoma AGCTAAGTTG 2.3 0.0023 Cb medulloblastoma ATGTGATTGT (2) 2.3 0.0023 Cb medulloblastoma TATTTCTAAA (3) 2.3 0.0023 P8 GC+1d culture TTAATAAAAT (12) 5.7 0.0057 P8 GC+1d culture GACACCAGAG (7) 4.6 0.0046 P8 GC+1d culture ATGTGATTGT (2) 3.4 0.0034 P8 GC+1d culture AGCTAAGTTG 1.1 0.0011 P8 GC+1d culture TATTTCTAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture GACACCAGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture TTAATAAAAT (12) 9.4 0.0094 P8 GC+SHH+1d culture AGCTAAGTTG 2.3 0.0023 P8 GC+SHH+1d culture TATTTCTAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture ATGTGATTGT (2) 1.2 0.0012 3T3 fibroblasts GACACCAGAG (7) 10.5 0.0105 3T3 fibroblasts CTGCTATGTG (4) 7 0.007 E15 cortex GACACCAGAG (7) 14.8 0.0148 E15 cortex TATTTCTAAA (3) 4.9 0.0049 P1 cortex GACACCAGAG (7) 36.4 0.0364 P1 cortex AGCTAAGTTG 4.5 0.0045 P1 cortex CTGCTATGTG (4) 4.5 0.0045 P1 cortex TTAATAAAAT (12) 4.5 0.0045 Hypothalamus GACACCAGAG (7) 45.3 0.0453 Hypothalamus TTAATAAAAT (12) 12.7 0.0127 Hypothalamus AGCTAAGTTG 3.6 0.0036 Hypothalamus ATGTGATTGT (2) 3.6 0.0036 Hypothalamus TATTTCTAAA (3) 1.8 0.0018 E12.5 retina TTAATAAAAT (12) 7.5 0.0075 E12.5 retina AGCTAAGTTG 1.9 0.0019 E12.5 retina ATGTGATTGT (2) 1.9 0.0019 E12.5 retina CTATTTGTTA 1.9 0.0019 E14.5 retina GACACCAGAG (7) 29.2 0.0292 E14.5 retina TTAATAAAAT (12) 14.6 0.0146 E14.5 retina ATGTGATTGT (2) 5.5 0.0055 E14.5 retina AGCTAAGTTG 3.6 0.0036 E16.5 retina GACACCAGAG (7) 21.7 0.0217 E16.5 retina TTAATAAAAT (12) 7.2 0.0072 E16.5 retina AGCTAAGTTG 1.8 0.0018 E16.5 retina ATGTGATTGT (2) 1.8 0.0018 E16.5 retina CTATTTGTTA 1.8 0.0018 E16.5 retina TATTTCTAAA (3) 1.8 0.0018 E18.5 retina TTAATAAAAT (12) 25.5 0.0255 E18.5 retina GACACCAGAG (7) 16.4 0.0164 E18.5 retina ATGTGATTGT (2) 7.3 0.0073 E18.5 retina AGCTAAGTTG 5.5 0.0055 E18.5 retina CAGTGGAGGG (4) 3.6 0.0036 E18.5 retina CTATTTGTTA 1.8 0.0018 E18.5 retina GCTGGCCTCC 1.8 0.0018 P0.5 retina GCTGGCCTCC 3.9 0.0039 P0.5 retina TTAATAAAAT (12) 3.9 0.0039 P0.5 retina CTATTTGTTA 2 0.002 P0.5 retina GACACCAGAG (7) 2 0.002 P2.5 retina GACACCAGAG (7) 12.3 0.0123 P2.5 retina TTAATAAAAT (12) 8.8 0.0088 P2.5 retina AGCTAAGTTG 1.8 0.0018 P2.5 retina ATGTGATTGT (2) 1.8 0.0018 P2.5 retina GCTGGCCTCC 1.8 0.0018 P4.5 retina GACACCAGAG (7) 19.8 0.0198 P4.5 retina TTAATAAAAT (12) 17.8 0.0178 P4.5 retina AGCTAAGTTG 4 0.004 P4.5 retina ATGTGATTGT (2) 4 0.004 P6.5 retina GACACCAGAG (7) 16.7 0.0167 P6.5 retina TTAATAAAAT (12) 6.7 0.0067 P6.5 retina ATGTGATTGT (2) 5 0.005 P6.5 retina GCTGGCCTCC 1.7 0.0017 P6.5 retina TATTTCTAAA (3) 1.7 0.0017 P10.5 crx- retina GACACCAGAG (7) 14.9 0.0149 P10.5 crx- retina TTAATAAAAT (12) 13 0.013 P10.5 crx- retina ATGTGATTGT (2) 9.3 0.0093 P10.5 crx+ retina GACACCAGAG (7) 21.1 0.0211 P10.5 crx+ retina ATGTGATTGT (2) 11.5 0.0115 P10.5 crx+ retina TTAATAAAAT (12) 3.8 0.0038 P10.5 crx+ retina CAGTGGAGGG (4) 1.9 0.0019 P10.5 crx+ retina TATTTCTAAA (3) 1.9 0.0019 Adult retinal GACACCAGAG (7) 14.8 0.0148 Adult retinal GCTGGCCTCC 3.7 0.0037 Adult retinal AGCTAAGTTG 1.9 0.0019 Adult retinal ATGTGATTGT (2) 1.9 0.0019 Adult retinal CTGCTATGTG (4) 1.9 0.0019 ONL ATGTGATTGT (2) 1.9 0.0019 ONL GCTGGCCTCC 1.9 0.0019 ONL TTAATAAAAT (12) 1.9 0.0019