Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8294	Vbp1	von Hippel-Lindau binding protein 1	X	X 30.8 cM	22327
Gene Ontology	chaperone activity | cytoplasm | nucleus | prefoldin complex | protein binding | protein folding
Human Homolog	VBP1[von Hippel-Lindau binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTATTAAAAT (6) 11.4 0.0114 P8 Cb GC AAACCCCATT (2) 4.9 0.0049 P8 Cb GC TTTAAAATTA (3) 3.3 0.0033 P8 Cb GC AATAAAAAAG (3) 1.6 0.0016 P8 Cb GC CAAAAGAAAA (8) 1.6 0.0016 Cb medulloblastoma AATAAAAAAG (3) 9.2 0.0092 Cb medulloblastoma TTATTAAAAT (6) 9.2 0.0092 Cb medulloblastoma CAGAAGAAAA (7) 6.9 0.0069 P8 GC+1d culture TTATTAAAAT (6) 12.6 0.0126 P8 GC+1d culture AATAAAAAAG (3) 5.7 0.0057 P8 GC+1d culture CAGAAGAAAA (7) 2.3 0.0023 P8 GC+1d culture AAACCCCATT (2) 1.1 0.0011 P8 GC+1d culture CAAAAGAAAA (8) 1.1 0.0011 P8 GC+1d culture TTAAATAAGC 1.1 0.0011 P8 GC+1d culture TTTAAAATTA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTATTAAAAT (6) 26.9 0.0269 P8 GC+SHH+1d culture CAGAAGAAAA (7) 4.7 0.0047 P8 GC+SHH+1d culture TTAAATAAGC 4.7 0.0047 P8 GC+SHH+1d culture AAACCCCATT (2) 2.3 0.0023 P8 GC+SHH+1d culture AATAAAAAAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CAAAAGAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TTTAAAATTA (3) 1.2 0.0012 3T3 fibroblasts CAGAAGAAAA (7) 10.5 0.0105 E15 cortex CAGAAGAAAA (7) 4.9 0.0049 P1 cortex TTATTAAAAT (6) 13.6 0.0136 P1 cortex AAAGCAGGCC 4.5 0.0045 P1 cortex CAAAAGAAAA (8) 4.5 0.0045 Hypothalamus TTATTAAAAT (6) 10.9 0.0109 Hypothalamus AATAAAAAAG (3) 5.4 0.0054 Hypothalamus CACAAGAAAA (3) 1.8 0.0018 Hypothalamus CAGAAGAAAA (7) 1.8 0.0018 Hypothalamus TTAAATAAGC 1.8 0.0018 Hypothalamus TTACTCTTCC (4) 1.8 0.0018 E12.5 retina TTATTAAAAT (6) 9.4 0.0094 E12.5 retina CAGAAGAAAA (7) 3.8 0.0038 E12.5 retina AATAAAAAAG (3) 1.9 0.0019 E14.5 retina TTATTAAAAT (6) 14.6 0.0146 E14.5 retina AATAAAAAAG (3) 3.6 0.0036 E14.5 retina TTACTCTTCC (4) 3.6 0.0036 E14.5 retina AAACCCCATT (2) 1.8 0.0018 E14.5 retina CACAAGAAAA (3) 1.8 0.0018 E14.5 retina TTTAAAATTA (3) 1.8 0.0018 E16.5 retina TTATTAAAAT (6) 12.7 0.0127 E16.5 retina CAGAAGAAAA (7) 5.4 0.0054 E16.5 retina AATAAAAAAG (3) 3.6 0.0036 E16.5 retina TTATTCCATC 3.6 0.0036 E18.5 retina TTATTAAAAT (6) 29.1 0.0291 E18.5 retina CAGAAGAAAA (7) 3.6 0.0036 E18.5 retina TTTAAAATTA (3) 1.8 0.0018 P0.5 retina CAGAAGAAAA (7) 5.9 0.0059 P0.5 retina TTATTAAAAT (6) 5.9 0.0059 P0.5 retina AAACCCCATT (2) 2 0.002 P0.5 retina AATAAAAAAG (3) 2 0.002 P0.5 retina TTAAATAAGC 2 0.002 P2.5 retina TTATTAAAAT (6) 10.6 0.0106 P2.5 retina AATAAAAAAG (3) 8.8 0.0088 P2.5 retina AAAGCAGGCC 3.5 0.0035 P2.5 retina TTTAAAATTA (3) 3.5 0.0035 P2.5 retina AAACCCCATT (2) 1.8 0.0018 P4.5 retina TTATTAAAAT (6) 11.9 0.0119 P4.5 retina AAAGCAGGCC 2 0.002 P4.5 retina AATAAAAAAG (3) 2 0.002 P4.5 retina TTACTCTTCC (4) 2 0.002 P6.5 retina TTATTAAAAT (6) 23.3 0.0233 P6.5 retina AAACCCCATT (2) 8.3 0.0083 P6.5 retina CAGAAGAAAA (7) 1.7 0.0017 P6.5 retina TTATTCCATC 1.7 0.0017 P10.5 crx- retina TTATTAAAAT (6) 9.3 0.0093 P10.5 crx- retina AATAAAAAAG (3) 3.7 0.0037 P10.5 crx- retina AAACCCCATT (2) 1.9 0.0019 P10.5 crx+ retina TTATTAAAAT (6) 9.6 0.0096 P10.5 crx+ retina AAACCCCATT (2) 5.8 0.0058 P10.5 crx+ retina CAGAAGAAAA (7) 3.8 0.0038 P10.5 crx+ retina AATAAAAAAG (3) 1.9 0.0019 P10.5 crx+ retina CACAAGAAAA (3) 1.9 0.0019 Adult retinal TTATTAAAAT (6) 5.6 0.0056 Adult retinal AAACCCCATT (2) 3.7 0.0037 Adult retinal AATAAAAAAG (3) 3.7 0.0037 ONL TTATTAAAAT (6) 7.7 0.0077 ONL AATAAAAAAG (3) 3.8 0.0038 ONL CACAAGAAAA (3) 1.9 0.0019