Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.83981
4933428L19Rik
RIKEN cDNA 4933428L19 gene
2
71198
Human Homolog
OTUD1[OTU domain containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGCCACTTT
(
2
)
3.3
0.0033
Cb medulloblastoma
CTTTTATGGA (
2
)
2.3
0.0023
P8 GC+1d culture
CTTTTATGGA (
2
)
GATTTCTTTT
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
TTGCCACTTT
(
2
)
1.2
0.0012
P1 cortex
CTCTTGAAAA
CTTTTATGGA (
2
)
GATTTCTTTT
(
2
)
GATTTTTTTT
(
3
)
TTGCCACTTT
(
2
)
22.5
0.0225
Hypothalamus
CTTTTATGGA (
2
)
1.8
0.0018
E12.5 retina
CTTTTATGGA (
2
)
1.9
0.0019
E14.5 retina
TTTCCACCAC
1.8
0.0018
E16.5 retina
TTTCCACCAC
1.8
0.0018
E18.5 retina
GATTTCTTTT
(
2
)
TTTCCACCAC
3.6
0.0036
P0.5 retina
TTGCCACTTT
(
2
)
2
0.002
P2.5 retina
GATTTCTTTT
(
2
)
TTGCCACTTT
(
2
)
7.1
0.0071
P4.5 retina
GATTTCTTTT
(
2
)
TTTCCACCAC
4
0.004
P6.5 retina
CTTTTATGGA (
2
)
GATTTCTTTT
(
2
)
3.4
0.0034
P10.5 crx- retina
CTCTTGAAAA
CTTTTATGGA (
2
)
TTGCCACTTT
(
2
)
9.3
0.0093
P10.5 crx+ retina
GATTTTTTTT
(
3
)
1.9
0.0019
Adult retinal
CTTTTATGGA (
2
)
1.9
0.0019
ONL
CTCTTGAAAA
TTGCCACTTT
(
2
)
3.8
0.0038
