Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.856	Tm4sf1	transmembrane 4 superfamily member 1	3		17112
Gene Ontology	integral to membrane
Human Homolog	TM4SF1[transmembrane 4 superfamily member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGATGGATG (5) 8.2 0.0082 P8 Cb GC AAAAAAAAAG (19) 3.3 0.0033 P8 Cb GC ATGTCAGTGT 1.6 0.0016 P8 Cb GC ATTTCAGTTT (6) 1.6 0.0016 P8 Cb GC TGATGACGTC 1.6 0.0016 Cb medulloblastoma AAAAAAAAAG (19) 13.9 0.0139 Cb medulloblastoma GGGATGGATG (5) 2.3 0.0023 P8 GC+1d culture GGGATGGATG (5) 13.7 0.0137 P8 GC+1d culture ATGTCAGTGT 4.6 0.0046 P8 GC+1d culture AAAAAAAAAG (19) 1.1 0.0011 P8 GC+1d culture TGATGACGTC 1.1 0.0011 P8 GC+SHH+1d culture GGGATGGATG (5) 12.9 0.0129 P8 GC+SHH+1d culture AAAAAAAAAG (19) 5.9 0.0059 P8 GC+SHH+1d culture ATGTCAGTGT 2.3 0.0023 3T3 fibroblasts GGGATGGATG (5) 3.5 0.0035 E15 cortex GGGATGGATG (5) 9.9 0.0099 P1 cortex AAAAAAAAAG (19) 9.1 0.0091 Hypothalamus ATGTCAGTGT 9.1 0.0091 Hypothalamus AAAAAAAAAG (19) 5.4 0.0054 Hypothalamus GGGATGGATG (5) 3.6 0.0036 E12.5 retina GGGATGGATG (5) 20.7 0.0207 E14.5 retina ATTTCAGTTT (6) 9.1 0.0091 E14.5 retina GGGATGGATG (5) 7.3 0.0073 E14.5 retina TGATGACGTC 1.8 0.0018 E16.5 retina GGGATGGATG (5) 14.5 0.0145 E18.5 retina GGGATGGATG (5) 9.1 0.0091 E18.5 retina AAAAAAAAAG (19) 5.5 0.0055 P0.5 retina GGGATGGATG (5) 5.9 0.0059 P2.5 retina GGGATGGATG (5) 8.8 0.0088 P2.5 retina AAAAAAAAAG (19) 3.5 0.0035 P4.5 retina GGGATGGATG (5) 39.6 0.0396 P4.5 retina AAAAAAAAAG (19) 13.9 0.0139 P6.5 retina GGGATGGATG (5) 26.7 0.0267 P6.5 retina AAAAAAAAAG (19) 8.3 0.0083 P10.5 crx- retina GGGATGGATG (5) 5.6 0.0056 P10.5 crx- retina AAAAAAAAAG (19) 1.9 0.0019 P10.5 crx- retina ATGTCAGTGT 1.9 0.0019 P10.5 crx+ retina GGGATGGATG (5) 11.5 0.0115 P10.5 crx+ retina AAAAAAAAAG (19) 7.7 0.0077 Adult retinal GGGATGGATG (5) 9.3 0.0093 Adult retinal AAAAAAAAAG (19) 1.9 0.0019 ONL AAAAAAAAAG (19) 1.9 0.0019 ONL GGGATGGATG (5) 1.9 0.0019