Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.86413
Pscd1
pleckstrin homology, Sec7 and coiled-coil domains 1
11
19157
Human Homolog
PSCD1[pleckstrin homology, Sec7 and coiled-coil domains 1(cytohesin 1)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCGACAACT (
3
)
8.2
0.0082
P8 Cb GC
CAGAGGAACA (
6
)
4.9
0.0049
Cb medulloblastoma
ACCGACAACT (
3
)
13.9
0.0139
Cb medulloblastoma
GGTCCCCGCT
(
4
)
2.3
0.0023
Cb medulloblastoma
TGAAGTTGAA (
3
)
2.3
0.0023
P8 GC+1d culture
ACCGACAACT (
3
)
11.4
0.0114
P8 GC+1d culture
TGAAGTTGAA (
3
)
3.4
0.0034
P8 GC+SHH+1d culture
ACCGACAACT (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TGAAGTTGAA (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GTGCTGGGTG
(
8
)
1.2
0.0012
3T3 fibroblasts
ACCGACAACT (
3
)
7
0.007
3T3 fibroblasts
GGTCCCCGCT
(
4
)
3.5
0.0035
3T3 fibroblasts
GTGCTGGGTG
(
8
)
3.5
0.0035
P1 cortex
ACCGACAACT (
3
)
4.5
0.0045
P1 cortex
TGAAGTTGAA (
3
)
4.5
0.0045
Hypothalamus
TGAAGTTGAA (
3
)
3.6
0.0036
Hypothalamus
ACCGACAACT (
3
)
1.8
0.0018
E12.5 retina
ACCGACAACT (
3
)
3.8
0.0038
E14.5 retina
ACCGACAACT (
3
)
10.9
0.0109
E16.5 retina
ACCGACAACT (
3
)
12.7
0.0127
E16.5 retina
TGAAGTTGAA (
3
)
1.8
0.0018
E18.5 retina
ACCGACAACT (
3
)
9.1
0.0091
P0.5 retina
ACCGACAACT (
3
)
7.9
0.0079
P0.5 retina
TGAAGTTGAA (
3
)
5.9
0.0059
P2.5 retina
ACCGACAACT (
3
)
7
0.007
P2.5 retina
TGAAGTTGAA (
3
)
1.8
0.0018
P4.5 retina
ACCGACAACT (
3
)
5.9
0.0059
P4.5 retina
TGAAGTTGAA (
3
)
2
0.002
P6.5 retina
TGAAGTTGAA (
3
)
5
0.005
P6.5 retina
ACCGACAACT (
3
)
1.7
0.0017
P6.5 retina
GGTCCCCGCT
(
4
)
1.7
0.0017
P10.5 crx- retina
ACCGACAACT (
3
)
3.7
0.0037
P10.5 crx- retina
GTGCTGGGTG
(
8
)
3.7
0.0037
P10.5 crx- retina
GGTCCCCGCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGAAGTTGAA (
3
)
9.6
0.0096
P10.5 crx+ retina
GGTCCCCGCT
(
4
)
3.8
0.0038
P10.5 crx+ retina
ACCGACAACT (
3
)
1.9
0.0019
Adult retinal
TGAAGTTGAA (
3
)
11.1
0.0111
Adult retinal
GGTCCCCGCT
(
4
)
7.4
0.0074
Adult retinal
ACCGACAACT (
3
)
1.9
0.0019
ONL
ACCGACAACT (
3
)
5.7
0.0057
ONL
TGAAGTTGAA (
3
)
1.9
0.0019
