Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.87532
Mga
MAX gene associated
2
29808
Mm.87532
6330405D24Rik
RIKEN cDNA 6330405D24 gene
2
70715
Mm.87532
D030062C11Rik
RIKEN cDNA D030062C11 gene
2
319375
Mm.87532
4930485G23Rik
RIKEN cDNA 4930485G23 gene
2
75808
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAACCTGAA
(
4
)
4.9
0.0049
P8 Cb GC
TTTCCTTATT
(
6
)
3.3
0.0033
P8 Cb GC
AAGCTTCATA
(
4
)
1.6
0.0016
P8 Cb GC
TGCCACCACA
(
4
)
1.6
0.0016
Cb medulloblastoma
AAGCTTCATA
(
4
)
4.6
0.0046
P8 GC+1d culture
TGAACCTGAA
(
4
)
6.8
0.0068
P8 GC+1d culture
AAGCTTCATA
(
4
)
2.3
0.0023
P8 GC+1d culture
GAATGTTTTT
(
4
)
2.3
0.0023
P8 GC+1d culture
TTTCCTTATT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAACCTGAA
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTCCTTATT
(
6
)
4.7
0.0047
P8 GC+SHH+1d culture
ATTGTTCTAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGCTTCATA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGACCACAG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCCACCACA
(
4
)
1.2
0.0012
3T3 fibroblasts
GTAGTGCACA
(
4
)
10.5
0.0105
3T3 fibroblasts
ATTGTTCTAA
(
4
)
3.5
0.0035
3T3 fibroblasts
CAGTTGATGG
(
4
)
3.5
0.0035
3T3 fibroblasts
TGAACCTGAA
(
4
)
3.5
0.0035
3T3 fibroblasts
TGCCACCACA
(
4
)
3.5
0.0035
E15 cortex
TGAACCTGAA
(
4
)
4.9
0.0049
P1 cortex
TTTCCTTATT
(
6
)
4.5
0.0045
Hypothalamus
AAGCTTCATA
(
4
)
5.4
0.0054
Hypothalamus
TGCCACCACA
(
4
)
5.4
0.0054
Hypothalamus
TGAACCTGAA
(
4
)
1.8
0.0018
E12.5 retina
TGAACCTGAA
(
4
)
3.8
0.0038
E12.5 retina
TTTCCTTATT
(
6
)
3.8
0.0038
E12.5 retina
TGCCACCACA
(
4
)
1.9
0.0019
E14.5 retina
TGCCACCACA
(
4
)
9.1
0.0091
E14.5 retina
TGAACCTGAA
(
4
)
5.5
0.0055
E14.5 retina
GAATGTTTTT
(
4
)
3.6
0.0036
E14.5 retina
TTTCCTTATT
(
6
)
1.8
0.0018
E16.5 retina
TGAACCTGAA
(
4
)
7.2
0.0072
E16.5 retina
AAGCTTCATA
(
4
)
1.8
0.0018
E16.5 retina
GAATGTTTTT
(
4
)
1.8
0.0018
E16.5 retina
GTGACCACAG
(
4
)
1.8
0.0018
E16.5 retina
TTTCCTTATT
(
6
)
1.8
0.0018
E18.5 retina
TGAACCTGAA
(
4
)
7.3
0.0073
E18.5 retina
AAGCTTCATA
(
4
)
1.8
0.0018
E18.5 retina
GAATGTTTTT
(
4
)
1.8
0.0018
P0.5 retina
TGCCACCACA
(
4
)
13.7
0.0137
P0.5 retina
AAGCTTCATA
(
4
)
3.9
0.0039
P0.5 retina
GAATGTTTTT
(
4
)
2
0.002
P0.5 retina
TTTCCTTATT
(
6
)
2
0.002
P2.5 retina
TGAACCTGAA
(
4
)
3.5
0.0035
P2.5 retina
AAGCTTCATA
(
4
)
1.8
0.0018
P2.5 retina
ATTGTTCTAA
(
4
)
1.8
0.0018
P2.5 retina
TGCCACCACA
(
4
)
1.8
0.0018
P4.5 retina
TGAACCTGAA
(
4
)
7.9
0.0079
P4.5 retina
GAATGTTTTT
(
4
)
5.9
0.0059
P4.5 retina
TTTCCTTATT
(
6
)
4
0.004
P6.5 retina
TGCCACCACA
(
4
)
8.3
0.0083
P6.5 retina
TTTCCTTATT
(
6
)
5
0.005
P6.5 retina
GAATGTTTTT
(
4
)
3.3
0.0033
P6.5 retina
TGAACCTGAA
(
4
)
3.3
0.0033
P10.5 crx- retina
TGCCACCACA
(
4
)
3.7
0.0037
P10.5 crx- retina
ATTGTTCTAA
(
4
)
1.9
0.0019
P10.5 crx- retina
TGAACCTGAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGAACCTGAA
(
4
)
3.8
0.0038
P10.5 crx+ retina
GAATGTTTTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTAGTGCACA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTGACCACAG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGCCACCACA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTTCCTTATT
(
6
)
1.9
0.0019
Adult retinal
TGAACCTGAA
(
4
)
5.6
0.0056
Adult retinal
TGCCACCACA
(
4
)
5.6
0.0056
Adult retinal
AAGCTTCATA
(
4
)
1.9
0.0019
Adult retinal
GAATGTTTTT
(
4
)
1.9
0.0019
ONL
AAGCTTCATA
(
4
)
3.8
0.0038
ONL
CAGTTGATGG
(
4
)
3.8
0.0038
ONL
GTAGTGCACA
(
4
)
3.8
0.0038
ONL
TGAACCTGAA
(
4
)
3.8
0.0038
ONL
GAATGTTTTT
(
4
)
1.9
0.0019
ONL
TGCCACCACA
(
4
)
1.9
0.0019
ONL
TTTCCTTATT
(
6
)
1.9
0.0019
