Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.87759	AU018797	expressed sequence AU018797	1		98531
Mm.87759	Enah	enabled homolog (Drosophila)	1	1 98.7 cM	13800
Mm.87759	2700078F05Rik	RIKEN cDNA 2700078F05 gene	1		72626
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 132 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CCGTGTGTTC (5) 13.1 0.0131 P8 Cb GC CCGCAGGCGT (3) 4.9 0.0049 P8 Cb GC TTTCTTGTTT (7) 4.9 0.0049 P8 Cb GC CAATTTTGTA (7) 3.3 0.0033 P8 Cb GC ACTAAATGTG (3) 1.6 0.0016 P8 Cb GC TGTATCATTT (4) 1.6 0.0016 P8 Cb GC TTAACAAAAC (6) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CCGTGTGTTC (5) 27.7 0.0277 Cb medulloblastoma CCGCAGGCGT (3) 4.6 0.0046 Cb medulloblastoma ACTAAATGTG (3) 2.3 0.0023 Cb medulloblastoma GTTATGAGGA (5) 2.3 0.0023 Cb medulloblastoma TACGCTGTTC (4) 2.3 0.0023 Cb medulloblastoma TGGACATTTT (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CCGTGTGTTC (5) 8 0.008 P8 GC+1d culture CAATTTTGTA (7) 3.4 0.0034 P8 GC+1d culture GTTATGAGGA (5) 3.4 0.0034 P8 GC+1d culture CCGCAGGCGT (3) 2.3 0.0023 P8 GC+1d culture CTCCCAGCAC (5) 2.3 0.0023 P8 GC+1d culture TACGCTGTTC (4) 2.3 0.0023 P8 GC+1d culture TTTCTTGTTT (7) 2.3 0.0023 P8 GC+1d culture AAAATATTTC (5) 1.1 0.0011 P8 GC+1d culture TCTAGATGAG (6) 1.1 0.0011 P8 GC+1d culture TTAACAAAAC (6) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCGTGTGTTC (5) 11.7 0.0117 P8 GC+SHH+1d culture CCGCAGGCGT (3) 4.7 0.0047 P8 GC+SHH+1d culture TGTATCATTT (4) 3.5 0.0035 P8 GC+SHH+1d culture CTCCCAGCAC (5) 1.2 0.0012 P8 GC+SHH+1d culture GTTATGAGGA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTAACAAAAC (6) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CCGTGTGTTC (5) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GTTATGAGGA (5) 10.5 0.0105 3T3 fibroblasts TACGCTGTTC (4) 7 0.007 3T3 fibroblasts CCGCAGGCGT (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CCGCAGGCGT (3) 9.9 0.0099 E15 cortex TACGCTGTTC (4) 9.9 0.0099 E15 cortex CTCCCAGCAC (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCGTGTGTTC (5) 13.6 0.0136 P1 cortex CAATTTTGTA (7) 4.5 0.0045 P1 cortex TTTCTTGTTT (7) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CCGTGTGTTC (5) 1.8 0.0018 Hypothalamus GTTATGAGGA (5) 1.8 0.0018 Hypothalamus TCTAGATGAG (6) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GTTATGAGGA (5) 9.4 0.0094 E12.5 retina CCGTGTGTTC (5) 5.6 0.0056 E12.5 retina TCTAGATGAG (6) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CCGTGTGTTC (5) 12.8 0.0128 E14.5 retina TTTCTTGTTT (7) 9.1 0.0091 E14.5 retina CCGCAGGCGT (3) 3.6 0.0036 E14.5 retina GTTATGAGGA (5) 3.6 0.0036 E14.5 retina TACGCTGTTC (4) 3.6 0.0036 E14.5 retina ACTAAATGTG (3) 1.8 0.0018 E14.5 retina CAATTTTGTA (7) 1.8 0.0018 E14.5 retina CTCCCAGCAC (5) 1.8 0.0018 E14.5 retina TTAACAAAAC (6) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CCGTGTGTTC (5) 9.1 0.0091 E16.5 retina GTTATGAGGA (5) 1.8 0.0018 E16.5 retina TCTAGATGAG (6) 1.8 0.0018 E16.5 retina TTTCTTGTTT (7) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CCGTGTGTTC (5) 9.1 0.0091 E18.5 retina CCGCAGGCGT (3) 3.6 0.0036 E18.5 retina CAATTTTGTA (7) 1.8 0.0018 E18.5 retina GTTATGAGGA (5) 1.8 0.0018 E18.5 retina TGTATCATTT (4) 1.8 0.0018 E18.5 retina TTTCTTGTTT (7) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CCGTGTGTTC (5) 5.9 0.0059 P0.5 retina GTTATGAGGA (5) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCGCAGGCGT (3) 2 0.002 P0.5 retina CTCCCAGCAC (5) 2 0.002 P0.5 retina TTTCTTGTTT (7) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CCGTGTGTTC (5) 12.3 0.0123 P2.5 retina TGTATCATTT (4) 3.5 0.0035 P2.5 retina TTTCTTGTTT (7) 3.5 0.0035 P2.5 retina AAAATATTTC (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCGTGTGTTC (5) 5.9 0.0059 P4.5 retina AAAATATTTC (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCTAGATGAG (6) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCGTGTGTTC (5) 11.7 0.0117 P6.5 retina CCGCAGGCGT (3) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TTTCTTGTTT (7) 3.3 0.0033 P6.5 retina CAATTTTGTA (7) 1.7 0.0017 P6.5 retina TCTAGATGAG (6) 1.7 0.0017 P6.5 retina TGGACATTTT (4) 1.7 0.0017 P6.5 retina TGTATCATTT (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CCGCAGGCGT (3) 5.6 0.0056 P10.5 crx- retina CCGTGTGTTC (5) 5.6 0.0056 P10.5 crx- retina GTTATGAGGA (5) 3.7 0.0037 P10.5 crx- retina TGTATCATTT (4) 3.7 0.0037 P10.5 crx- retina TTTCTTGTTT (7) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CCGTGTGTTC (5) 9.6 0.0096 P10.5 crx+ retina CCGCAGGCGT (3) 7.7 0.0077 P10.5 crx+ retina GTTATGAGGA (5) 3.8 0.0038 P10.5 crx+ retina CAATTTTGTA (7) 1.9 0.0019 P10.5 crx+ retina CTCCCAGCAC (5) 1.9 0.0019 P10.5 crx+ retina TACGCTGTTC (4) 1.9 0.0019 P10.5 crx+ retina TCTAGATGAG (6) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCGTGTGTTC (5) 18.5 0.0185 Adult retinal CCGCAGGCGT (3) 5.6 0.0056 Adult retinal GTTATGAGGA (5) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GTTATGAGGA (5) 5.7 0.0057 ONL TGGACATTTT (4) 3.8 0.0038 ONL CAATTTTGTA (7) 1.9 0.0019 ONL CCGTGTGTTC (5) 1.9 0.0019 ONL TCTAGATGAG (6) 1.9 0.0019 ONL TTTCTTGTTT (7) 1.9 0.0019