Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88364	Tnks	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	8	8 18.0 cM	21951
Human Homolog	TNKS[tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGGGTTCT 8.2 0.0082 P8 Cb GC GATCAGAAAA (2) 6.5 0.0065 P8 Cb GC GTGGGGTTTT (4) 4.9 0.0049 P8 Cb GC TAGGCTGGTT 3.3 0.0033 Cb medulloblastoma GTGGGGTTTT (4) 16.2 0.0162 Cb medulloblastoma GTGGGGTTCT 4.6 0.0046 Cb medulloblastoma GATCAGAAAA (2) 2.3 0.0023 Cb medulloblastoma TAGGCTGGTT 2.3 0.0023 P8 GC+1d culture GTGGGGTTTT (4) 11.4 0.0114 P8 GC+1d culture GTGGGGTTCT 8 0.008 P8 GC+1d culture GATCAGAAAA (2) 5.7 0.0057 P8 GC+1d culture TAGGCTGGTT 5.7 0.0057 P8 GC+1d culture CTGTGAGCCT (2) 3.4 0.0034 P8 GC+SHH+1d culture GATCAGAAAA (2) 7 0.007 P8 GC+SHH+1d culture GTGGGGTTCT 5.9 0.0059 P8 GC+SHH+1d culture GTGGGGTTTT (4) 4.7 0.0047 P8 GC+SHH+1d culture TAGGCTGGTT 4.7 0.0047 P8 GC+SHH+1d culture GATCAGAAAG (5) 1.2 0.0012 P8 GC+SHH+1d culture TAAATTCTCT 1.2 0.0012 P8 GC+SHH+1d culture TGTGGTGTAA (5) 1.2 0.0012 3T3 fibroblasts GTGGGGTTCT 3.5 0.0035 3T3 fibroblasts GTGGGGTTTT (4) 3.5 0.0035 E15 cortex GTGGGGTTTT (4) 24.7 0.0247 E15 cortex GATCAGAAAA (2) 14.8 0.0148 E15 cortex GATCAGAAAG (5) 4.9 0.0049 E15 cortex TGTGCCAGCC (4) 4.9 0.0049 P1 cortex GTGGGGTTCT 9.1 0.0091 P1 cortex GATCAGAAAA (2) 4.5 0.0045 P1 cortex GTGGGGTTTT (4) 4.5 0.0045 Hypothalamus GATCAGAAAA (2) 3.6 0.0036 Hypothalamus CTGTGAGCCT (2) 1.8 0.0018 Hypothalamus GTGGGGTTCT 1.8 0.0018 Hypothalamus TAAATTCTCT 1.8 0.0018 Hypothalamus TAGGCTGGTT 1.8 0.0018 Hypothalamus TGTGCCAGCC (4) 1.8 0.0018 Hypothalamus TGTGGTGTAA (5) 1.8 0.0018 E12.5 retina GTGGGGTTTT (4) 13.1 0.0131 E12.5 retina GTGGGGTTCT 5.6 0.0056 E12.5 retina TAGGCTGGTT 5.6 0.0056 E12.5 retina GATCAGAAAA (2) 3.8 0.0038 E12.5 retina ACGAGCTGTT (3) 1.9 0.0019 E12.5 retina GATCAGAAAG (5) 1.9 0.0019 E14.5 retina GTGGGGTTTT (4) 10.9 0.0109 E14.5 retina GTGGGGTTCT 3.6 0.0036 E14.5 retina GATCAGAAAA (2) 1.8 0.0018 E14.5 retina GATCAGAAAG (5) 1.8 0.0018 E14.5 retina TAGGCTGGTT 1.8 0.0018 E16.5 retina GTGGGGTTTT (4) 16.3 0.0163 E16.5 retina TAGGCTGGTT 7.2 0.0072 E16.5 retina TGTGGTGTAA (5) 1.8 0.0018 E18.5 retina GTGGGGTTTT (4) 12.7 0.0127 E18.5 retina GATCAGAAAA (2) 10.9 0.0109 E18.5 retina ACGAGCTGTT (3) 1.8 0.0018 E18.5 retina GTGGGGTTCT 1.8 0.0018 P0.5 retina GTGGGGTTTT (4) 11.8 0.0118 P0.5 retina GATCAGAAAG (5) 2 0.002 P0.5 retina GTGGGGTTCT 2 0.002 P2.5 retina GTGGGGTTTT (4) 15.8 0.0158 P2.5 retina GTGGGGTTCT 5.3 0.0053 P2.5 retina TAGGCTGGTT 5.3 0.0053 P2.5 retina CTGTGAGCCT (2) 3.5 0.0035 P2.5 retina GATCAGAAAA (2) 1.8 0.0018 P4.5 retina GTGGGGTTTT (4) 19.8 0.0198 P4.5 retina GTGGGGTTCT 7.9 0.0079 P4.5 retina GATCAGAAAA (2) 4 0.004 P4.5 retina ACGAGCTGTT (3) 2 0.002 P4.5 retina TAGGCTGGTT 2 0.002 P6.5 retina GTGGGGTTTT (4) 11.7 0.0117 P6.5 retina TAGGCTGGTT 3.3 0.0033 P6.5 retina CTGTGAGCCT (2) 1.7 0.0017 P6.5 retina GATCAGAAAA (2) 1.7 0.0017 P6.5 retina TAAATTCTCT 1.7 0.0017 P6.5 retina TGTGCCAGCC (4) 1.7 0.0017 P10.5 crx- retina GTGGGGTTTT (4) 11.1 0.0111 P10.5 crx- retina GTGGGGTTCT 3.7 0.0037 P10.5 crx- retina CTGTGAGCCT (2) 1.9 0.0019 P10.5 crx- retina GATCAGAAAA (2) 1.9 0.0019 P10.5 crx- retina TAGGCTGGTT 1.9 0.0019 P10.5 crx+ retina GTGGGGTTTT (4) 13.5 0.0135 P10.5 crx+ retina CTGTGAGCCT (2) 3.8 0.0038 P10.5 crx+ retina GATCAGAAAA (2) 3.8 0.0038 P10.5 crx+ retina GTGGGGTTCT 1.9 0.0019 P10.5 crx+ retina TAAATTCTCT 1.9 0.0019 P10.5 crx+ retina TAGGCTGGTT 1.9 0.0019 Adult retinal GTGGGGTTTT (4) 13 0.013 Adult retinal GTGGGGTTCT 3.7 0.0037 Adult retinal TAGGCTGGTT 3.7 0.0037 ONL GTGGGGTTTT (4) 5.7 0.0057 ONL TAGGCTGGTT 1.9 0.0019